Spectral clustering on protein-protein interaction networks via constructing affinity matrix using attributed graph embedding
The identification of protein complexes in protein-protein interaction networks is the most
fundamental and essential problem for revealing the underlying mechanism of biological …
fundamental and essential problem for revealing the underlying mechanism of biological …
[HTML][HTML] Decision tree classifier based on topological characteristics of subgraph for the mining of protein complexes from large scale PPI networks
The growing accessibility of large-scale protein interaction data demands extensive
research to understand cell organization and its functioning at the network level …
research to understand cell organization and its functioning at the network level …
Pattern discovery in multilayer networks
Motivation: In bioinformatics, complex cellular modeling and behavior simulation to identify
significant molecular interactions is considered a relevant problem. Traditional methods …
significant molecular interactions is considered a relevant problem. Traditional methods …
[HTML][HTML] Computational identification of protein complexes from network interactions: present state, challenges, and the way forward
Physically interacting proteins form macromolecule complexes that drive diverse cellular
processes. Advances in experimental techniques that capture interactions between proteins …
processes. Advances in experimental techniques that capture interactions between proteins …
[HTML][HTML] Antiviral Properties of Essential Oil Mixture: Modulation of E7 and E2 Protein Pathways in Human Papillomavirus (HPV) Infection
B Uner, E Guler, ME Vicir, H Kayhan, N Atsu… - Journal of …, 2024 - Elsevier
Ethnopharmacological relevance Clove is used in Indian and Chinese traditional medicine
for viral diseases. Palmarosa essential oils have been traditionally used in India and …
for viral diseases. Palmarosa essential oils have been traditionally used in India and …
[HTML][HTML] Protein complex prediction in large protein–protein interaction network
Due to high computational complexity, the detection of protein complexes in large protein–
protein interaction (PPI) networks remains a challenging problem. Finding the actual protein …
protein interaction (PPI) networks remains a challenging problem. Finding the actual protein …
An evolutionary algorithm with heuristic operator for detecting protein complexes in protein interaction networks with negative controls
Computational biology research faces a formidable challenge in the detection of complexes
within protein-protein interaction (PPI) networks, critical for unraveling cellular processes …
within protein-protein interaction (PPI) networks, critical for unraveling cellular processes …
[HTML][HTML] 基于图嵌入和布谷鸟搜索的二步蛋白质复合物预测方法
葛永錱， 赵熙强 - 中国海洋大学学报(自然科学版), 2022 - xml-data.org
本文构造了一种基于图嵌入技术和布谷鸟搜索的二步蛋白质复合物预测方法(TSSComplex),
该算法可在蛋白质交互(PPI) 网络上探测蛋白质复合物. 采用图嵌入技术, 更新边权的计算方式 …
该算法可在蛋白质交互(PPI) 网络上探测蛋白质复合物. 采用图嵌入技术, 更新边权的计算方式 …
Protein complex prediction based on dense sub-graph merging
Protein complex prediction is an essential task in cell biology to understand and analyse the
Protein-Protein Interaction (PPI) networks, further bringing about the knowledge of many …
Protein-Protein Interaction (PPI) networks, further bringing about the knowledge of many …
Enhanced Protein Complex Detection Using Square Clustering Coefficient
P Mirzaee, M Roayaei - 2024 - researchsquare.com
Identifying protein complexes from protein-protein interaction networks is one of the crucial
tasks in computational biology. Traditional methods, along with their shortcomings in fully …
tasks in computational biology. Traditional methods, along with their shortcomings in fully …