Transposable elements shape the evolution of mammalian development

AD Senft, TS Macfarlan - Nature Reviews Genetics, 2021 - nature.com
Transposable elements (TEs) promote genetic innovation but also threaten genome stability.
Despite multiple layers of host defence, TEs actively shape mammalian-specific …

[HTML][HTML] The human transcription factors

SA Lambert, A Jolma, LF Campitelli, PK Das, Y Yin… - Cell, 2018 - cell.com
Transcription factors (TFs) recognize specific DNA sequences to control chromatin and
transcription, forming a complex system that guides expression of the genome. Despite keen …

Global reference mapping of human transcription factor footprints

J Vierstra, J Lazar, R Sandstrom, J Halow, K Lee… - Nature, 2020 - nature.com
Combinatorial binding of transcription factors to regulatory DNA underpins gene regulation
in all organisms. Genetic variation in regulatory regions has been connected with diseases …

Defining the human C2H2 zinc finger degrome targeted by thalidomide analogs through CRBN

QL Sievers, G Petzold, RD Bunker, A Renneville… - Science, 2018 - science.org
INTRODUCTION Thalidomide, lenalidomide, and pomalidomide are clinically approved
therapies for the treatment of multiple myeloma and other hematologic malignancies. These …

Thalidomide promotes degradation of SALL4, a transcription factor implicated in Duane Radial Ray syndrome

KA Donovan, J An, RP Nowak, JC Yuan, EC Fink… - elife, 2018 - elifesciences.org
In historical attempts to treat morning sickness, use of the drug thalidomide led to the birth of
thousands of children with severe birth defects. Despite their teratogenicity, thalidomide and …

C2H2 zinc finger proteins: master regulators of abiotic stress responses in plants

G Han, C Lu, J Guo, Z Qiao, N Sui, N Qiu… - Frontiers in plant …, 2020 - frontiersin.org
Abiotic stresses such as drought and salinity are major environmental factors that limit crop
yields. Unraveling the molecular mechanisms underlying abiotic stress resistance is crucial …

Integrated molecular analysis of adult T cell leukemia/lymphoma

K Kataoka, Y Nagata, A Kitanaka, Y Shiraishi… - Nature …, 2015 - nature.com
Adult T cell leukemia/lymphoma (ATL) is a peripheral T cell neoplasm of largely unknown
genetic basis, associated with human T cell leukemia virus type-1 (HTLV-1) infection. Here …

Zinc-based biomaterials for regeneration and therapy

Y Su, I Cockerill, Y Wang, YX Qin, L Chang… - Trends in …, 2019 - cell.com
Zinc has been described as the 'calcium of the twenty-first century'. Zinc-based degradable
biomaterials have recently emerged thanks to their intrinsic physiological relevance …

DNA-dependent formation of transcription factor pairs alters their binding specificity

A Jolma, Y Yin, KR Nitta, K Dave, A Popov, M Taipale… - Nature, 2015 - nature.com
Gene expression is regulated by transcription factors (TFs), proteins that recognize short
DNA sequence motifs,,. Such sequences are very common in the human genome, and an …

Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …