Recent advances in molecular techniques to study microbial communities in food-associated matrices and processes
In the last two decades major changes have occurred in how microbial ecologists study
microbial communities. Limitations associated with traditional culture-based methods have …
microbial communities. Limitations associated with traditional culture-based methods have …
An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data
D Ramsköld, ET Wang, CB Burge… - PLoS computational …, 2009 - journals.plos.org
The parts of the genome transcribed by a cell or tissue reflect the biological processes and
functions it carries out. We characterized the features of mammalian tissue transcriptomes at …
functions it carries out. We characterized the features of mammalian tissue transcriptomes at …
What to compare and how: comparative transcriptomics for evo‐devo
J Roux, M Rosikiewicz… - Journal of Experimental …, 2015 - Wiley Online Library
Evolutionary developmental biology has grown historically from the capacity to relate
patterns of evolution in anatomy to patterns of evolution of expression of specific genes …
patterns of evolution in anatomy to patterns of evolution of expression of specific genes …
Divergence of human and mouse brain transcriptome highlights Alzheimer disease pathways
Because mouse models play a crucial role in biomedical research related to the human
nervous system, understanding the similarities and differences between mouse and human …
nervous system, understanding the similarities and differences between mouse and human …
Tempo and mode of regulatory evolution in Drosophila
Genetic changes affecting gene expression contribute to phenotypic divergence; thus,
understanding how regulatory networks controlling gene expression change over time is …
understanding how regulatory networks controlling gene expression change over time is …
Null mutations in human and mouse orthologs frequently result in different phenotypes
One-to-one orthologous genes of relatively closely related species are widely assumed to
have similar functions and cause similar phenotypes when deleted from the genome …
have similar functions and cause similar phenotypes when deleted from the genome …
The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes
Various databases have harnessed the wealth of publicly available microarray data to
address biological questions ranging from across-tissue differential expression to …
address biological questions ranging from across-tissue differential expression to …
Application of transcriptional benchmark dose values in quantitative cancer and noncancer risk assessment
RS Thomas, HJ Clewell III, BC Allen… - Toxicological …, 2011 - academic.oup.com
The traditional approach for estimating noncancer and cancer reference values in
quantitative chemical risk assessment is time and resource intensive. The extent and nature …
quantitative chemical risk assessment is time and resource intensive. The extent and nature …
Large scale comparison of global gene expression patterns in human and mouse
Background It is widely accepted that orthologous genes between species are conserved at
the sequence level and perform similar functions in different organisms. However, the level …
the sequence level and perform similar functions in different organisms. However, the level …
Genome-wide identification, evolutionary and expression analysis of the aspartic protease gene superfamily in grape
R Guo, X Xu, B Carole, X Li, M Gao, Y Zheng, X Wang - BMC genomics, 2013 - Springer
Abstract Background Aspartic proteases (APs) are a large family of proteolytic enzymes
found in almost all organisms. In plants, they are involved in many biological processes …
found in almost all organisms. In plants, they are involved in many biological processes …