An Improved Protocol for Quantification of Freshwater Actinobacteria by Fluorescence In Situ Hybridization

R Sekar, A Pernthaler, J Pernthaler… - Applied and …, 2003 - Am Soc Microbiol
We tested a previously described protocol for fluorescence in situ hybridization of marine
bacterioplankton with horseradish peroxidase-labeled rRNA-targeted oligonucleotide …

Seasonal bloom dynamics and ecophysiology of the freshwater sister clade of SAR11 bacteria 'that rule the waves'(LD12)

MM Salcher, J Pernthaler, T Posch - The ISME journal, 2011 - academic.oup.com
Alphaproteobacteria are common members of marine bacterioplankton assemblages, but
are believed to be rare in lacustrine systems. However, uncultured Alphaproteobacteria of …

Raman-Deuterium Isotope Probing for in-situ identification of antimicrobial resistant bacteria in Thames River

Y Song, L Cui, JÁS López, J Xu, YG Zhu… - Scientific reports, 2017 - nature.com
The emergence and widespread distribution of antimicrobial resistant (AMR) bacteria has
led to an increasing concern with respect to potential environmental and public health risks …

Improved detection of soil microorganisms using fluorescence in situ hybridization (FISH) and catalyzed reporter deposition (CARD-FISH)

T Eickhorst, R Tippkötter - Soil Biology and Biochemistry, 2008 - Elsevier
In recent years, methods of molecular microbiology have been used for the investigation of
soil microbial diversity. Fluorescence in situ hybridization (FISH) represents a method which …

Микробная" петля" в планктонных сообществах морских и пресноводных экосистемах

АИ Копылов, ДБ Косолапов - 2011 - elibrary.ru
В книге обобщены и систематизированы результаты многолетних исследований
планктонных микробных трофических сетей морских, пресноводных и …

Effects of the phenylurea herbicide diuron on natural riverine microbial communities in an experimental study

S Pesce, C Fajon, C Bardot, F Bonnemoy, C Portelli… - Aquatic Toxicology, 2006 - Elsevier
The effects of the phenylurea herbicide diuron (10μgl− 1) on natural riverine microbial
communities were investigated using a three-week laboratory microcosm study. During the …

Phagotrophic ciliates and flagellates in an oligotrophic, deep, alpine lake: contrasting variability with seasons and depths

B Sonntag, T Posch, S Klammer, K Teubner… - Aquatic Microbial …, 2006 - int-res.com
We followed the changes in the protist assemblage over an annual cycle at 3 sites and
different depths of Traunsee in the Austrian Alps and quantified the variability of the ciliate …

Metaproteomic survey of six aquatic habitats: discovering the identities of microbial populations active in biogeochemical cycling

BT Hanson, I Hewson, EL Madsen - Microbial ecology, 2014 - Springer
Our goal is to strengthen the foundations of metaproteomics as a microbial community
analysis tool that links the functional identity of actively expressed gene products with host …

Impact of pesticide contamination on aquatic microorganism populations in the littoral zone

S Lew, M Lew, A Biedunkiewicz, J Szarek - Archives of environmental …, 2013 - Springer
The effect of pesticide contamination of the littoral zone on the population of bacteria and
fungi was analyzed using the example of a eutrophic water reservoir exposed for> 30 years …

Succession of bacterial grazing defense mechanisms against protistan predators in an experimental microbial community

MM Salcher, J Pernthaler, R Psenner… - Aquatic microbial ecology, 2005 - int-res.com
We studied the effects of 2 bacterivorous protistan predators on the phenotypic and
taxonomic successions of an experimental bacterial community growing in continuous …