[HTML][HTML] Modeling approaches for probing cross-feeding interactions in the human gut microbiome

P Saa, A Urrutia, C Silva-Andrade, AJ Martín… - Computational and …, 2022 - Elsevier
Microbial communities perform emergent activities that are essentially different from those
carried by their individual members. The gut microbiome and its metabolites have a …

Review of artificial intelligence applications and algorithms for brain organoid research

J Badai, Q Bu, L Zhang - Interdisciplinary Sciences: Computational Life …, 2020 - Springer
The human brain organoid is a miniature three-dimensional tissue culture that can simulate
the structure and function of the brain in an in vitro culture environment. Although we …

Dexamethasone Induces Changes in Osteogenic Differentiation of Human Mesenchymal Stromal Cells via SOX9 and PPARG, but Not RUNX2

E Della Bella, A Buetti-Dinh, G Licandro… - International journal of …, 2021 - mdpi.com
Despite the huge body of research on osteogenic differentiation and bone tissue
engineering, the translation potential of in vitro results still does not match the effort …

[HTML][HTML] Enhancing Colorectal Cancer Immunotherapy: The Pivotal Role of Ferroptosis in Modulating the Tumor Microenvironment

Y Li, X Cheng - International Journal of Molecular Sciences, 2024 - mdpi.com
Colorectal cancer (CRC) represents a significant challenge in oncology, with increasing
incidence and mortality rates worldwide, particularly among younger adults. Despite …

[PDF][PDF] Advancements and use of omic technologies in the field of bioleaching: a review

A Pattanaik, DK Samal, LB Sukla… - Biointerface Res Appl …, 2020 - biointerfaceresearch.com
Bioleaching is an environmentally safe as well as economically feasible alternative to the
conventional process of metal extraction from low-grade ores. It involves the recovery of …

Multi-omics protein-coding units as massively parallel Bayesian networks: Empirical validation of causality structure

A Zenere, O Rundquist, M Gustafsson, C Altafini - Iscience, 2022 - cell.com
In this article we use high-throughput epigenomics, transcriptomics, and proteomics data to
construct fine-graded models of the" protein-coding units" gathering all transcript isoforms …

Systems biology of acidophile biofilms for efficient metal extraction

A Buetti-Dinh, M Herold, S Christel, ME Hajjami… - Scientific data, 2020 - nature.com
Society's demand for metals is ever increasing while stocks of high-grade minerals are
being depleted. Biomining, for example of chalcopyrite for copper recovery, is a more …

From laboratory towards industrial operation: biomarkers for acidophilic metabolic activity in bioleaching systems

S Marín, M Cortés, M Acosta, K Delgado, C Escuti… - Genes, 2021 - mdpi.com
In the actual mining scenario, copper bioleaching, mainly raw mined material known as run-
of-mine (ROM) copper bioleaching, is the best alternative for the treatment of marginal …

Biohydrometallurgical Metal Recycling/Recovery from E‐waste: Current Trend, Challenges, and Future Perspective

SC Thacker, DR Tipre, SR Dave - Management of Electronic …, 2024 - Wiley Online Library
The volume of e‐waste is growing rapidly and is becoming a secondary resource for metal
recovery. Currently, the modern mining industry needs the recycling of secondary resources …

Gene regulatory network inference based on a nonhomogeneous dynamic Bayesian network model with an improved Markov Monte Carlo sampling

J Zhang, C Hu, Q Zhang - BMC bioinformatics, 2023 - Springer
A nonhomogeneous dynamic Bayesian network model, which combines the dynamic
Bayesian network and the multi-change point process, solves the limitations of the dynamic …