Dynamics and function of DNA methylation in plants
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …
Gene body DNA methylation in plants
AJ Bewick, RJ Schmitz - Current opinion in plant biology, 2017 - Elsevier
Highlights•GbM is typified by mCG within coding regions, and depletion at the TSS and
TTS.•Species without gbM revealed an unexpected role for CMT3 in the evolution of …
TTS.•Species without gbM revealed an unexpected role for CMT3 in the evolution of …
DNA methylation-free Arabidopsis reveals crucial roles of DNA methylation in regulating gene expression and development
L He, H Huang, M Bradai, C Zhao, Y You, J Ma… - Nature …, 2022 - nature.com
A contribution of DNA methylation to defense against invading nucleic acids and
maintenance of genome integrity is uncontested; however, our understanding of the extent …
maintenance of genome integrity is uncontested; however, our understanding of the extent …
Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems
A Papikian, W Liu, J Gallego-Bartolomé… - Nature …, 2019 - nature.com
Understanding genomic functions requires site-specific manipulation of loci via efficient
protein effector targeting systems. However, few approaches for targeted manipulation of the …
protein effector targeting systems. However, few approaches for targeted manipulation of the …
An ABCC-type transporter endowing glyphosate resistance in plants
Glyphosate is the most widely used herbicide in world agriculture and for general vegetation
control in a wide range of situations. Global and often intensive glyphosate selection of very …
control in a wide range of situations. Global and often intensive glyphosate selection of very …
The Norway spruce genome sequence and conifer genome evolution
Conifers have dominated forests for more than 200 million years and are of huge ecological
and economic importance. Here we present the draft assembly of the 20-gigabase genome …
and economic importance. Here we present the draft assembly of the 20-gigabase genome …
Genome-wide detection of cytosine methylations in plant from Nanopore data using deep learning
In plants, cytosine DNA methylations (5mCs) can happen in three sequence contexts as
CpG, CHG, and CHH (where H= A, C, or T), which play different roles in the regulation of …
CpG, CHG, and CHH (where H= A, C, or T), which play different roles in the regulation of …
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
JA Law, SE Jacobsen - Nature Reviews Genetics, 2010 - nature.com
Cytosine DNA methylation is a stable epigenetic mark that is crucial for diverse biological
processes, including gene and transposon silencing, imprinting and X chromosome …
processes, including gene and transposon silencing, imprinting and X chromosome …
Genome-wide evolutionary analysis of eukaryotic DNA methylation
A Zemach, IE McDaniel, P Silva, D Zilberman - Science, 2010 - science.org
Eukaryotic cytosine methylation represses transcription but also occurs in the bodies of
active genes, and the extent of methylation biology conservation is unclear. We quantified …
active genes, and the extent of methylation biology conservation is unclear. We quantified …
[HTML][HTML] Origins and mechanisms of miRNAs and siRNAs
RW Carthew, EJ Sontheimer - Cell, 2009 - cell.com
Over the last decade,∼ 20–30 nucleotide RNA molecules have emerged as critical
regulators in the expression and function of eukaryotic genomes. Two primary categories of …
regulators in the expression and function of eukaryotic genomes. Two primary categories of …