Genome folding through loop extrusion by SMC complexes

IF Davidson, JM Peters - Nature reviews Molecular cell biology, 2021 - nature.com
Genomic DNA is folded into loops and topologically associating domains (TADs), which
serve important structural and regulatory roles. It has been proposed that these genomic …

Looping the genome with SMC complexes

E Kim, R Barth, C Dekker - Annual review of biochemistry, 2023 - annualreviews.org
SMC (structural maintenance of chromosomes) protein complexes are an evolutionarily
conserved family of motor proteins that hold sister chromatids together and fold genomes …

[HTML][HTML] Localization atomic force microscopy

GR Heath, E Kots, JL Robertson, S Lansky… - Nature, 2021 - nature.com
Understanding structural dynamics of biomolecules at the single-molecule level is vital to
advancing our knowledge of molecular mechanisms. Currently, there are few techniques …

Organization of chromosomal DNA by SMC complexes

S Yatskevich, J Rhodes, K Nasmyth - Annual review of genetics, 2019 - annualreviews.org
Structural maintenance of chromosomes (SMC) complexes are key organizers of
chromosome architecture in all kingdoms of life. Despite seemingly divergent functions, such …

The condensin complex is a mechanochemical motor that translocates along DNA

T Terakawa, S Bisht, JM Eeftens, C Dekker… - Science, 2017 - science.org
Condensin plays crucial roles in chromosome organization and compaction, but the
mechanistic basis for its functions remains obscure. We used single-molecule imaging to …

Human condensin I and II drive extensive ATP-dependent compaction of nucleosome-bound DNA

M Kong, EE Cutts, D Pan, F Beuron, T Kaliyappan… - Molecular cell, 2020 - cell.com
Structural maintenance of chromosomes (SMC) complexes are essential for genome
organization from bacteria to humans, but their mechanisms of action remain poorly …

Towards a unified model of SMC complex function

M Hassler, IA Shaltiel, CH Haering - Current Biology, 2018 - cell.com
Protein complexes built of structural maintenance of chromosomes (SMC) and kleisin
subunits, including cohesin, condensin and the Smc5/6 complex, are master organizers of …

Cryo-EM structures of holo condensin reveal a subunit flip-flop mechanism

BG Lee, F Merkel, M Allegretti, M Hassler… - Nature structural & …, 2020 - nature.com
Complexes containing a pair of structural maintenance of chromosomes (SMC) family
proteins are fundamental for the three-dimensional (3D) organization of genomes in all …

Structure of full-length SMC and rearrangements required for chromosome organization

ML Diebold-Durand, H Lee, LBR Avila, H Noh, HC Shin… - Molecular cell, 2017 - cell.com
Multi-subunit SMC complexes control chromosome superstructure and promote
chromosome disjunction, conceivably by actively translocating along DNA double helices …

A Brownian ratchet model for DNA loop extrusion by the cohesin complex

TL Higashi, G Pobegalov, M Tang, MI Molodtsov… - Elife, 2021 - elifesciences.org
The cohesin complex topologically encircles DNA to promote sister chromatid cohesion.
Alternatively, cohesin extrudes DNA loops, thought to reflect chromatin domain formation …