Amazing symmetrical clustering in chloroplast genomes

MG Sadovsky, MY Senashova, AV Malyshev - BMC bioinformatics, 2020 - Springer
Background Previously, a seven-cluster pattern claiming to be a universal one in bacterial
genomes has been reported. Keeping in mind the most popular theory of chloroplast origin …

Towards the structuredness of non-coding regions of chloroplast genomes

IK Gorban, MY Senashova… - Journal of Physics …, 2020 - iopscience.iop.org
A triplet frequency dictionary is stipulated to be a structure of non-coding DNA fragments of
chloroplast genomes. We retrieved the ensembles of the non-coding regions from 391 …

[PDF][PDF] Intrinsic Structuredness of Mitochondria Genomes

M Sadovsky - ceur-ws.org
Previously, a seven-cluster pattern for bacterial genomes has been reported. The pattern is
revealed through the distribution of the formally identified short fragments of a genome …

[PDF][PDF] Variation in the Structure of Cyanobacteria Genomes with the Length of the Sliding Window

M Sadovsky - ceur-ws.org
A seven-cluster pattern for bacterial genomes has been reported. The pattern is revealed
through the distribution of formally identified short fragments of a genome converted into …

Amazing symmetrical clustering in chloroplast genomes

МГ Садовский, МЮ Сенашова, АВ Малышев - 2020 - elib.sfu-kras.ru
Background. Previously, a seven-cluster pattern claiming to be a universal one in bacterial
genomes has been reported. Keeping in mind the most popular theory of chloroplast origin …

Revealing the Symmetry of Conifer Transcriptomes through Triplet Statistics

S Michael, P Yulia, B Vladislav, S Maria - Transcriptome Analysis, 2019 - books.google.com
The novel powerful technique is used for a study of combinatorial and statistical properties of
transcriptome sequences. The main approach stands on the study of distribution of …

Non-Coding Regions of Chloroplast Genomes Exhibit a Structuredness of Five Types

M Sadovsky, M Senashova, I Gorban… - … : 7th International Work …, 2019 - Springer
We studied the statistical properties of non-coding regions of chloroplast genomes of 391
plants. To do that, each non-coding region has been tiled with a set of overlapping …

Triplet Frequencies Implementation in Total Transcriptome Analysis

M Sadovsky, T Guseva, V Biriukov - … , IWBBIO 2019, Granada, Spain, May 8 …, 2019 - Springer
We studied the structuredness in total transcriptome of Siberian larch. To do that, the contigs
from total transcriptome has been labeled with the reads comprising the tissue specific …

Triplet Frequencies Implementation in Total Transcriptome Analysis

МГ Садовский, ТА Гусева, ВВ Бирюков - 2019 - elib.sfu-kras.ru
We studied the structuredness in total transcriptome of Siberian larch. To do that, the contigs
from total transcriptome has been labeled with the reads comprising the tissue specific …

Non-Coding Regions of Chloroplast Genomes Exhibit a Structuredness of Five Types

МГ Садовский, МЮ Сенашова, ИК Горбань… - 2019 - elib.sfu-kras.ru
We studied the statistical properties of non-coding regions of chloroplast genomes of 391
plants. To do that, each non-coding region has been tiled with a set of overlapping …