Participation of histones in DNA damage and repair within nucleosome core particles: mechanism and applications

M Ren, MM Greenberg, C Zhou - Accounts of chemical research, 2022 - ACS Publications
Conspectus DNA is damaged by various endogenous and exogenous sources, leading to a
diverse group of reactive intermediates that yield a complex mixture of products. The initially …

Human TDP1, APE1 and TREX1 repair 3′-DNA–peptide/protein cross-links arising from abasic sites in vitro

X Wei, Z Wang, C Hinson, K Yang - Nucleic acids research, 2022 - academic.oup.com
Histones and many other proteins react with abundant endogenous DNA lesions,
apurinic/apyrimidinic (abasic, AP) sites and/or 3′-phospho-α, β-unsaturated aldehyde (3 …

Ribozyme‐Catalyzed Late‐Stage Functionalization and Fluorogenic Labeling of RNA

CPM Scheitl, T Okuda, J Adelmann… - Angewandte Chemie …, 2023 - Wiley Online Library
Site‐specific introduction of bioorthogonal handles into RNAs is in high demand for
decorating RNAs with fluorophores, affinity labels or other modifications. Aldehydes …

A General Method to Edit Histone H3 Modifications on Chromatin Via Sortase‐Mediated Metathesis

Q Yang, Y Gao, X Liu, Y Xiao… - Angewandte Chemie …, 2022 - Wiley Online Library
The post‐translational modifications (PTMs) on the tail of histone H3 control chromatin
structure and influence epigenetics and gene expression. The current chemical methods …

Synthesis and Excision Repair of Site-Specific 3′-End DNA-Histone Cross-Links Derived from Abasic Sites

Y Peng, X Wei, K Yang - Bioconjugate Chemistry, 2023 - ACS Publications
Histones catalyze the DNA strand incision at apurinic/apyrimidinic (AP) sites accompanied
by formation of reversible but long-lived DNA–protein cross-links (DPCs) at 3′-DNA termini …

In vitro selected ribozymes for RNA methylation and labeling

CPM Scheitl - 2023 - opus.bibliothek.uni-wuerzburg.de
The focus of this work was the development and application of highly efficient RNA catalysts
for the site-specific modification of RNA with special focus on methylation. In the course of …

Synthesis and applications of modified nucleosides and RNA nucleotides

C Stiller - 2023 - opus.bibliothek.uni-wuerzburg.de
As central components of life, DNA and RNA encode the genetic information. However, RNA
performs several functions that exceed the competences stated in the 'central dogma of life ' …

INVESTIGATING THE DOWNSTREAM REACTIONS AND EFFECTS OF DNA METHYLATION AND ONE ELECTRON OXIDATION IN NUCLEOSOME CORE …

T Wen - 2024 - jscholarship.library.jhu.edu
DNA damage caused by alkylation and oxidation is harmful to cells, potentially leading to
cell death or cancer. Alkylating drugs and radiotherapy exploit this cytotoxicity to kill tumor …

[PDF][PDF] NMR studies on the nucleosome and chromatin factors

VR Lobbia - 2022 - core.ac.uk
Chromatin is vital to compaction and regulation of the DNA in eukaryotes and is intimately
involved in DNA expression, replication, and repair. As one of the cell's biggest polymers …