Comprehensive classification of ABC ATPases and their functional radiation in nucleoprotein dynamics and biological conflict systems

A Krishnan, AM Burroughs, LM Iyer… - Nucleic acids …, 2020 - academic.oup.com
ABC ATPases form one of the largest clades of P-loop NTPase fold enzymes that catalyze
ATP-hydrolysis and utilize its free energy for a staggering range of functions from transport to …

Xer site specific recombination: double and single recombinase systems

F Castillo, A Benmohamed, G Szatmari - Frontiers in microbiology, 2017 - frontiersin.org
The separation and segregation of newly replicated bacterial chromosomes can be
constrained by the formation of circular chromosome dimers caused by crossing over during …

RecF protein targeting to post-replication (daughter strand) gaps II: recF interaction with replisomes

C Henry, G Kaur, ME Cherry, SS Henrikus… - Nucleic Acids …, 2023 - academic.oup.com
Abstract The bacterial RecF, RecO, and RecR proteins are an epistasis group involved in
loading RecA protein into post-replication gaps. However, the targeting mechanism that …

PrimPol is required for replication reinitiation after mtDNA damage

R Torregrosa-Muñumer… - Proceedings of the …, 2017 - National Acad Sciences
Eukaryotic PrimPol is a recently discovered DNA-dependent DNA primase and translesion
synthesis DNA polymerase found in the nucleus and mitochondria. Although PrimPol has …

[HTML][HTML] Distribution of bacterial DNA repair proteins and their co-occurrence with immune systems

SK Mutte, P Barendse, PB Ugarte, DC Swarts - Cell Reports, 2025 - Elsevier
Bacteria encode various DNA repair pathways to maintain genome integrity. However, the
high degree of homology between DNA repair proteins or their domains hampers accurate …

Rad5 coordinates translesion DNA synthesis pathway by recognizing specific DNA structures in saccharomyces cerevisiae

Q Fan, X Xu, X Zhao, Q Wang, W Xiao, Y Guo, YV Fu - Current genetics, 2018 - Springer
DNA repair is essential to maintain genome integrity. In addition to various DNA repair
pathways dealing with specific types of DNA lesions, DNA damage tolerance (DDT) …

DNA2—an important player in DNA damage response or just another DNA maintenance protein?

E Pawłowska, J Szczepanska, J Blasiak - International journal of …, 2017 - mdpi.com
The human DNA2 (DNA replication helicase/nuclease 2) protein is expressed in both the
nucleus and mitochondria, where it displays ATPase-dependent nuclease and helicase …

New Insights into Radio-Resistance Mechanism Revealed by (Phospho)Proteome Analysis of Deinococcus Radiodurans after Heavy Ion Irradiation

S Liu, F Wang, H Chen, Z Yang, Y Ning… - International Journal of …, 2023 - mdpi.com
Deinococcus radiodurans (D. radiodurans) can tolerate various extreme environments
including radiation. Protein phosphorylation plays an important role in radiation resistance …

A defect in homologous recombination leads to increased translesion synthesis in E. coli

K Naiman, V Pages, RP Fuchs - Nucleic acids research, 2016 - academic.oup.com
DNA damage tolerance pathways allow cells to duplicate their genomes despite the
presence of replication blocking lesions. Cells possess two major tolerance strategies …

Development of a counterselectable system for rapid and efficient CRISPR-based genome engineering in Zymomonas mobilis

Y Zheng, H Fu, J Chen, J Li, Y Bian, P Hu, L Lei… - Microbial Cell …, 2023 - Springer
Background Zymomonas mobilis is an important industrial bacterium ideal for biorefinery
and synthetic biology studies. High-throughput CRISPR-based genome editing technologies …