Free resources to assist structure-based virtual ligand screening experiments
BO Villoutreix, N Renault, D Lagorce… - Current Protein and …, 2007 - ingentaconnect.com
In today's research environment, a wealth of experimental/theoretical structural data is
available and the number of therapeutically relevant macromolecular structures is growing …
available and the number of therapeutically relevant macromolecular structures is growing …
Blind men and elephants: What do citation summaries tell us about a research article?
The old Asian legend about the blind men and the elephant comes to mind when looking at
how different authors of scientific papers describe a piece of related prior work. It turns out …
how different authors of scientific papers describe a piece of related prior work. It turns out …
Dynamic and electrostatic effects on the reaction catalyzed by HIV-1 protease
A Krzeminska, V Moliner… - Journal of the American …, 2016 - ACS Publications
HIV-1 Protease (HIV-1 PR) is one of the three enzymes essential for the replication process
of HIV-1 virus, which explains why it has been the main target for design of drugs against …
of HIV-1 virus, which explains why it has been the main target for design of drugs against …
RPBS: a web resource for structural bioinformatics
C Alland, F Moreews, D Boens… - Nucleic acids …, 2005 - academic.oup.com
Abstract RPBS (Ressource Parisienne en Bioinformatique Structurale) is a resource
dedicated primarily to structural bioinformatics. It is the result of a joint effort by several teams …
dedicated primarily to structural bioinformatics. It is the result of a joint effort by several teams …
Reactivity and selectivity of iminium organocatalysis improved by a protein host
There has been growing interest in performing organocatalysis within a supramolecular
system as a means of controlling reaction reactivity and stereoselectivity. Here, a protein is …
system as a means of controlling reaction reactivity and stereoselectivity. Here, a protein is …
Local protein structures
Protein structures are classically described as composed of two regular states, the α-helices
and the β-strands and one non-regular and variable state, the coil. Nonetheless, this simple …
and the β-strands and one non-regular and variable state, the coil. Nonetheless, this simple …
Solution structure of the silkworm βGRP/GNBP3 N-terminal domain reveals the mechanism for β-1, 3-glucan-specific recognition
K Takahasi, M Ochiai, M Horiuchi… - Proceedings of the …, 2009 - National Acad Sciences
The β-1, 3-glucan recognition protein (βGRP)/Gram-negative bacteria-binding protein 3
(GNBP3) is a crucial pattern-recognition receptor that specifically binds β-1, 3-glucan, a …
(GNBP3) is a crucial pattern-recognition receptor that specifically binds β-1, 3-glucan, a …
Krit 1 interactions with microtubules and membranes are regulated by Rap1 and integrin cytoplasmic domain associated protein‐1
S Béraud‐Dufour, R Gautier, C Albiges‐Rizo… - The FEBS …, 2007 - Wiley Online Library
The small G protein Rap1 regulates diverse cellular processes such as integrin activation,
cell adhesion, cell–cell junction formation and cell polarity. It is crucial to identify Rap1 …
cell adhesion, cell–cell junction formation and cell polarity. It is crucial to identify Rap1 …
SABBAC: online Structural Alphabet-based protein BackBone reconstruction from Alpha-Carbon trace
J Maupetit, R Gautier, P Tufféry - Nucleic acids research, 2006 - academic.oup.com
SABBAC is an on-line service devoted to protein backbone reconstruction from alpha-
carbon trace. It is based on the assembly of fragments taken from a library of reduced size …
carbon trace. It is based on the assembly of fragments taken from a library of reduced size …
Improved cryoEM-guided iterative molecular dynamics–Rosetta protein structure refinement protocol for high precision protein structure prediction
S Lindert, JA McCammon - Journal of chemical theory and …, 2015 - ACS Publications
Many excellent methods exist that incorporate cryo-electron microscopy (cryoEM) data to
constrain computational protein structure prediction and refinement. Previously, it was …
constrain computational protein structure prediction and refinement. Previously, it was …