Role of lipids in the interaction of antimicrobial peptides with membranes
V Teixeira, MJ Feio, M Bastos - Progress in lipid research, 2012 - Elsevier
Antimicrobial peptides (AMPs) take part in the immune system by mounting a first line of
defense against pathogens. Recurrent structural and functional aspects are observed …
defense against pathogens. Recurrent structural and functional aspects are observed …
Forces contributing to the conformational stability of proteins
CN Pace, BA Shirley, M McNutt… - The FASEB journal, 1996 - Wiley Online Library
For 35 years, the prevailing view has been that the hydrophobic effect is the dominant force
in protein folding. The importance of hydrogen bonding was always clear, but whether it …
in protein folding. The importance of hydrogen bonding was always clear, but whether it …
A rational strategy for the realization of chain-growth supramolecular polymerization
J Kang, D Miyajima, T Mori, Y Inoue, Y Itoh, T Aida - Science, 2015 - science.org
Over the past decade, major progress in supramolecular polymerization has had a
substantial effect on the design of functional soft materials. However, despite recent …
substantial effect on the design of functional soft materials. However, despite recent …
[HTML][HTML] A helix propensity scale based on experimental studies of peptides and proteins
CN Pace, JM Scholtz - Biophysical journal, 1998 - cell.com
The average globular protein contains 30% α-helix, the most common type of secondary
structure. Some amino acids occur more frequently in α-helices than others; this tendency is …
structure. Some amino acids occur more frequently in α-helices than others; this tendency is …
Optimized molecular dynamics force fields applied to the helix− coil transition of polypeptides
Obtaining the correct balance of secondary structure propensities is a central priority in
protein force-field development. Given that current force fields differ significantly in their α …
protein force-field development. Given that current force fields differ significantly in their α …
Effective energy function for proteins in solution
T Lazaridis, M Karplus - Proteins: Structure, Function, and …, 1999 - Wiley Online Library
A Gaussian solvent‐exclusion model for the solvation free energy is developed. It is based
on theoretical considerations and parametrized with experimental data. When combined …
on theoretical considerations and parametrized with experimental data. When combined …
De novo protein design: fully automated sequence selection
BI Dahiyat, SL Mayo - Science, 1997 - science.org
The first fully automated design and experimental validation of a novel sequence for an
entire protein is described. A computational design algorithm based on physical chemical …
entire protein is described. A computational design algorithm based on physical chemical …
Mechanism of helix induction by trifluoroethanol: a framework for extrapolating the helix-forming properties of peptides from trifluoroethanol/water mixtures back to …
P Luo, RL Baldwin - Biochemistry, 1997 - ACS Publications
To establish a framework for extrapolating the helix-forming properties of peptides from
TFE/H2O mixtures (TFE= 2, 2, 2-trifluoroethanol) back to water, the thermal unfolding curves …
TFE/H2O mixtures (TFE= 2, 2, 2-trifluoroethanol) back to water, the thermal unfolding curves …
Elucidating the folding problem of helical peptides using empirical parameters
V Muñoz, L Serrano - Nature structural biology, 1994 - nature.com
Using an empirical analysis of experimental data we have estimated a set of energy
contributions which accounts for the stability of isolated α-helices. With this database and an …
contributions which accounts for the stability of isolated α-helices. With this database and an …
[HTML][HTML] Energetics of protein structure
GI Makhatadze, PL Privalov - Advances in protein chemistry, 1995 - Elsevier
Publisher Summary This chapter summarizes the experimental information on protein
energetics. This field is developing fast and the concept of the energetics of protein structure …
energetics. This field is developing fast and the concept of the energetics of protein structure …