Stability indices to deciphering the genotype-by-environment interaction (GEI) effect: An applicable review for use in plant breeding programs

A Pour-Aboughadareh, M Khalili, P Poczai, T Olivoto - Plants, 2022 - mdpi.com
Experiments measuring the interaction between genotypes and environments measure the
spatial (eg, locations) and temporal (eg, years) separation and/or combination of these …

Breeding crops for drought-affected environments and improved climate resilience

M Cooper, CD Messina - The Plant Cell, 2023 - academic.oup.com
Breeding climate-resilient crops with improved levels of abiotic and biotic stress resistance
as a response to climate change presents both opportunities and challenges. Applying the …

metan: An R package for multi‐environment trial analysis

T Olivoto, ADC Lúcio - Methods in Ecology and Evolution, 2020 - Wiley Online Library
Multi‐environment trials (MET) are crucial steps in plant breeding programs that aim at
increasing crop productivity to ensure global food security. The analysis of MET data …

Mean performance and stability in multi‐environment trials I: combining features of AMMI and BLUP techniques

T Olivoto, ADC Lúcio, JAG da Silva… - Agronomy …, 2019 - Wiley Online Library
Additive main effect and multiplicative interaction (AMMI) and best linear unbiased
prediction (BLUP) are popular methods for analyzing multi‐environment trials (MET). The …

Mean performance and stability in multi‐environment trials II: Selection based on multiple traits

T Olivoto, ADC Lúcio, JAG da Silva, BG Sari… - Agronomy …, 2019 - Wiley Online Library
Modeling the genotype× environment interaction (GEI) and quantifying genotypic stability
are crucial steps for selecting/recommending genotypes in multi‐environment trials (METs) …

[HTML][HTML] Modelling strategies for assessing and increasing the effectiveness of new phenotyping techniques in plant breeding

FA Van Eeuwijk, D Bustos-Korts, EJ Millet, MP Boer… - Plant science, 2019 - Elsevier
New types of phenotyping tools generate large amounts of data on many aspects of plant
physiology and morphology with high spatial and temporal resolution. These new …

Enviromics in breeding: applications and perspectives on envirotypic-assisted selection

RT Resende, HP Piepho, GJM Rosa… - Theoretical and Applied …, 2021 - Springer
Key message We propose the application of enviromics to breeding practice, by which the
similarity among sites assessed on an “omics” scale of environmental attributes drives the …

The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment

AR Rogers, JC Dunne, C Romay, M Bohn, ES Buckler… - G3, 2021 - academic.oup.com
High-dimensional and high-throughput genomic, field performance, and environmental data
are becoming increasingly available to crop breeding programs, and their integration can …

Introduction to a special issue on genotype by environment interaction

N de Leon, JL Jannink, JW Edwards… - Crop Science, 2016 - Wiley Online Library
Expression of a phenotype is a function of the genotype, the environment, and the
differential sensitivity of certain genotypes to different environments, also known as …

Linking photosynthesis and yield reveals a strategy to improve light use efficiency in a climbing bean breeding population

B Keller, J Soto, A Steier… - Journal of …, 2024 - academic.oup.com
Photosynthesis drives plant physiology, biomass accumulation, and yield. Photosynthetic
efficiency, specifically the operating efficiency of PSII (F q'/F m'), is highly responsive to …