Analysis of thermal melting curves
JL Mergny, L Lacroix - Oligonucleotides, 2003 - liebertpub.com
Tm is defined as Temperature of melting or, more accurately, as temperature of
midtransition. This term is often used for nucleic acids (DNA and RNA, oligonucleotides and …
midtransition. This term is often used for nucleic acids (DNA and RNA, oligonucleotides and …
Physics of base-pairing dynamics in DNA
M Manghi, N Destainville - Physics Reports, 2016 - Elsevier
As a key molecule of life, Deoxyribo-Nucleic Acid (DNA) is the focus of numbers of
investigations with the help of biological, chemical and physical techniques. From a physical …
investigations with the help of biological, chemical and physical techniques. From a physical …
uMELT: prediction of high-resolution melting curves and dynamic melting profiles of PCR products in a rich web application
uMelt SM is a flexible web-based tool for predicting DNA melting curves and denaturation
profiles of PCR products. The user defines an amplicon sequence and chooses a set of …
profiles of PCR products. The user defines an amplicon sequence and chooses a set of …
Generic eukaryotic core promoter prediction using structural features of DNA
Despite many recent efforts, in silico identification of promoter regions is still in its infancy.
However, the accurate identification and delineation of promoter regions is important for …
However, the accurate identification and delineation of promoter regions is important for …
Multi-spectroscopic and molecular modeling studies to reveal the interaction between propyl acridone and calf thymus DNA in the presence of histone H1: Binary and …
N Shakibapour, F Dehghani Sani… - Journal of …, 2019 - Taylor & Francis
DNA is the primary target of many anticancer drugs involved in important intercellular
processes, especially in transcriptional regulation, and histone is known to inhibit gene …
processes, especially in transcriptional regulation, and histone is known to inhibit gene …
Roles of stiffness and excluded volume in DNA denaturation
E Carlon, E Orlandini, AL Stella - Physical review letters, 2002 - APS
The nature and the universal properties of DNA thermal denaturation are investigated by
Monte Carlo simulations. For suitable lattice models we determine the exponent c describing …
Monte Carlo simulations. For suitable lattice models we determine the exponent c describing …
Large-scale structural analysis of the core promoter in mammalian and plant genomes
DNA encodes at least two independent levels of functional information. The first level is for
encoding proteins and sequence targets for DNA-binding factors, while the second one is …
encoding proteins and sequence targets for DNA-binding factors, while the second one is …
Modified oligonucleotides for mismatch discrimination
RO Dempcy, AA Gall, SG Lokhov, IA Afonina… - US Patent …, 2006 - Google Patents
US7045610B2 - Modified oligonucleotides for mismatch discrimination - Google Patents
US7045610B2 - Modified oligonucleotides for mismatch discrimination - Google Patents …
US7045610B2 - Modified oligonucleotides for mismatch discrimination - Google Patents …
β sheets not required: Combined experimental and computational studies of self-assembly and gelation of the ester-containing analogue of an Fmoc-dipeptide …
In our work toward developing ester-containing self-assembling peptides as soft
biomaterials, we have found that a fluorenylmethoxycarbonyl (Fmoc)-conjugated alanine …
biomaterials, we have found that a fluorenylmethoxycarbonyl (Fmoc)-conjugated alanine …
Bubble nucleation and cooperativity in DNA melting
Y Zeng, A Montrichok, G Zocchi - Journal of molecular biology, 2004 - Elsevier
Bubbles in DNA are related to fundamental processes such as duplication and transcription.
Using a new ensemble technique to trap intermediate states, we present direct …
Using a new ensemble technique to trap intermediate states, we present direct …