Chemical nucleases

DS Sigman, A Mazumder, DM Perrin - Chemical Reviews, 1993 - ACS Publications
The first-order rate constants for the hydrolysis of a phosphodiester bond under
physiological conditions have been estimated to be 6 X 10-9 and 6 X 10-10 min-1 for single …

Molecular biology of the LysR family of transcriptional regulators

MA Schell - Annual review of microbiology, 1993 - annualreviews.org
MOLECULAR BIOLOGY OF THE LysR FAMILY OF TRANSCRIPTIONAL REGULATORS Page 1
Annu. Rev. Microbiol. 1993. 47:597-{J26 Copyright © 1993 by Annual Reviews Inc. All rights …

Electrophoretic mobility shift assay (EMSA) for detecting protein–nucleic acid interactions

LM Hellman, MG Fried - Nature protocols, 2007 - nature.com
The gel electrophoresis mobility shift assay (EMSA) is used to detect protein complexes with
nucleic acids. It is the core technology underlying a wide range of qualitative and …

Hydroxyl radical-mediated modification of proteins as probes for structural proteomics

G Xu, MR Chance - Chemical reviews, 2007 - ACS Publications
“Footprinting” refers to assays that examine ligand binding and conformational changes by
determining the solvent accessibility of the backbone, bases, or side chain structures of …

Hydroxyl radical protein footprinting: a mass spectrometry-based structural method for studying the higher order structure of proteins

A McKenzie-Coe, NS Montes, LM Jones - Chemical reviews, 2021 - ACS Publications
Hydroxyl radical protein footprinting (HRPF) coupled to mass spectrometry has been
successfully used to investigate a plethora of protein-related questions. The method, which …

Scissors-grip model for DNA recognition by a family of leucine zipper proteins

CR Vinson, PB Sigler, SL McKnight - Science, 1989 - science.org
C/EBP is a sequence-specific DNA binding protein that regulates gene expression in certain
mammalian cells. The region of the C/EBP polypeptide required for specific recognition of …

Histones: at the crossroads of peptide and protein chemistry

MM Müller, TW Muir - Chemical reviews, 2015 - ACS Publications
1. INTRODUCTION In eukaryotic cells, inheritable information is stored in a nucleoprotein
complex referred to as chromatin. 1 This genome architecture serves two key purposes. On …

DNA and RNA cleavage by metal complexes

G Pratviel, J Bernadou, B Meunier - Advances in Inorganic Chemistry, 1998 - Elsevier
Publisher Summary This chapter discusses DNA and RNA cleavage by metal complexes.
DNA and RNA cleavage, a very active field of research, has been developed in two main …

Carbon—hydrogen bonds of DNA sugar units as targets for chemical nucleases and drugs

G Pratviel, J Bernadou… - … International Edition in …, 1995 - Wiley Online Library
This review article focuses on the molecular aspects of DNA cleavage by synthetic chemical
nucleases (transition metal complexes endowed with redox properties and DNA affinity) and …

The tardigrade damage suppressor protein binds to nucleosomes and protects DNA from hydroxyl radicals

C Chavez, G Cruz-Becerra, J Fei, GA Kassavetis… - Elife, 2019 - elifesciences.org
Tardigrades, also known as water bears, are animals that can survive extreme conditions.
The tardigrade Ramazzottius varieornatus contains a unique nuclear protein termed Dsup …