[HTML][HTML] Genome size diversity and its impact on the evolution of land plants

J Pellicer, O Hidalgo, S Dodsworth, IJ Leitch - Genes, 2018 - mdpi.com
Genome size is a biodiversity trait that shows staggering diversity across eukaryotes, varying
over 64,000-fold. Of all major taxonomic groups, land plants stand out due to their …

Next-generation sequencing—an overview of the history, tools, and “Omic” applications

JK Kulski - Next generation sequencing-advances, applications …, 2016 - books.google.com
Next-generation sequencing (NGS) technologies using DNA, RNA, or methylation
sequencing have impacted enormously on the life sciences. NGS is the choice for large …

Polyploidy: pitfalls and paths to a paradigm

DE Soltis, CJ Visger, DB Marchant… - American journal of …, 2016 - Wiley Online Library
Investigators have long searched for a polyploidy paradigm—rules or principles that might
be common following polyploidization (whole‐genome duplication, WGD). Here we attempt …

Doubling down on genomes: polyploidy and crop plants

S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …

Post-polyploid diploidization and diversification through dysploid changes

T Mandáková, MA Lysak - Current opinion in plant biology, 2018 - Elsevier
Highlights•Post-polyploid diploidization (PPD) in angiosperms usually operates by
descending dysploidy.•PPD is acting with differing intensities and rates.•Multiple base …

Impact of transposable elements on polyploid plant genomes

CM Vicient, JM Casacuberta - Annals of Botany, 2017 - academic.oup.com
Background The growing wealth of knowledge on whole-plant genome sequences is
highlighting the key role of transposable elements (TEs) in plant evolution, as a driver of …

Genomic repeat abundances contain phylogenetic signal

S Dodsworth, MW Chase, LJ Kelly, IJ Leitch… - Systematic …, 2015 - academic.oup.com
A large proportion of genomic information, particularly repetitive elements, is usually ignored
when researchers are using next-generation sequencing. Here we demonstrate the …

Ecological Roles and Biological Activities of Specialized Metabolites from the Genus Nicotiana

AR Jassbi, S Zare, M Asadollahi… - Chemical …, 2017 - ACS Publications
Species of Nicotiana grow naturally in different parts of the world and have long been used
both medicinally and recreationally by human societies. More recently in our history …

Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering

T Mandáková, M Pouch, JR Brock, IA Al-Shehbaz… - The Plant …, 2019 - academic.oup.com
Complexes of diploid and polyploid species have formed frequently during the evolution of
land plants. In false flax (Camelina sativa), an important hexaploid oilseed crop closely …

[HTML][HTML] Time-calibrated phylogenetic trees establish a lag between polyploidisation and diversification in Nicotiana (Solanaceae)

JJ Clarkson, S Dodsworth, MW Chase - Plant Systematics and Evolution, 2017 - Springer
We investigate the timing of diversification in allopolyploids of Nicotiana (Solanaceae)
utilising sequence data of maternal and paternal origin to look for evidence of a lag phase …