Reviewing methods of deep learning for diagnosing COVID-19, its variants and synergistic medicine combinations

Q Rafique, A Rehman, MS Afghan, HM Ahmad… - Computers in Biology …, 2023 - Elsevier
The COVID-19 pandemic has necessitated the development of reliable diagnostic methods
for accurately detecting the novel coronavirus and its variants. Deep learning (DL) …

Repeated mRNA vaccination sequentially boosts SARS-CoV-2-specific CD8+ T cells in persons with previous COVID-19

ES Ford, K Mayer-Blackwell, L Jing, KJ Laing… - Nature …, 2024 - nature.com
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) hybrid immunity is more
protective than vaccination or previous infection alone. To investigate the kinetics of spike …

Neuro-PASC is characterized by enhanced CD4+ and diminished CD8+ T cell responses to SARS-CoV-2 Nucleocapsid protein

L Visvabharathy, BA Hanson, ZS Orban… - Frontiers in …, 2023 - frontiersin.org
Introduction Many people with long COVID symptoms suffer from debilitating neurologic post-
acute sequelae of SARS-CoV-2 infection (Neuro-PASC). Although symptoms of Neuro …

Tracking DNA-based antigen-specific T cell receptors during progression to type 1 diabetes

AM Mitchell, EE Baschal, KA McDaniel, T Fleury… - Science …, 2023 - science.org
T cells targeting self-proteins are important mediators in autoimmune diseases. T cells
express unique cell-surface receptors (TCRs) that recognize peptides presented by major …

Progress in kidney transplantation: The role for systems immunology

AC Johnson, JAF Silva, SC Kim, CP Larsen - Frontiers in Medicine, 2022 - frontiersin.org
The development of systems biology represents an immense breakthrough in our ability to
perform translational research and deliver personalized and precision medicine. A …

Anti-spike T-cell and antibody responses to SARS-CoV-2 mRNA vaccines in patients with hematologic malignancies

LM Greenberger, LA Saltzman, LM Gruenbaum… - Blood cancer …, 2022 - AACR
The anti-spike T-cell and antibody responses to SARS-CoV-2 mRNA vaccines in patients
with B-cell malignancies were examined in a real-world setting. A next-generation …

SARS-CoV-2 specific immune responses in overweight and obese COVID-19 patients

TB Onyango, F Zhou, G Bredholt, KA Brokstad… - Frontiers in …, 2023 - frontiersin.org
Obesity is a known risk factor for severe respiratory tract infections. In this prospective study,
we assessed the impact of being obese or overweight on longitudinal SARS-CoV-2 humoral …

[HTML][HTML] T cell response to intact SARS-CoV-2 includes coronavirus cross-reactive and variant-specific components

L Jing, X Wu, MP Krist, TY Hsiang, VL Campbell… - JCI insight, 2022 - ncbi.nlm.nih.gov
SARS-CoV-2 provokes a robust T cell response. Peptide-based studies exclude antigen
processing and presentation biology, which may influence T cell detection studies. To focus …

[HTML][HTML] Durable immune responses after BNT162b2 vaccination in home-dwelling old adults

L Hansen, KA Brokstad, A Bansal, F Zhou, G Bredholt… - Vaccine: X, 2023 - Elsevier
Objectives Elderly are an understudied, high-risk group vulnerable to severe COVID-19. We
comprehensively analyzed the durability of humoral and cellular immune responses after …

Diagnosing Viral Infections Through T-Cell Receptor Sequencing of Activated CD8+ T Cells

A Vujkovic, M Ha, T de Block… - The Journal of …, 2024 - academic.oup.com
T-cell–based diagnostic tools identify pathogen exposure but lack differentiation between
recent and historical exposures in acute infectious diseases. Here, T-cell receptor (TCR) …