The fate of organic carbon in marine sediments-New insights from recent data and analysis

DE LaRowe, S Arndt, JA Bradley, ER Estes… - Earth-Science …, 2020 - Elsevier
Organic carbon in marine sediments is a critical component of the global carbon cycle, and
its degradation influences a wide range of phenomena, including the magnitude of carbon …

Ecology and evolution of seafloor and subseafloor microbial communities

WD Orsi - Nature Reviews Microbiology, 2018 - nature.com
Vast regions of the dark ocean have ultra-slow rates of organic matter sedimentation, and
their sediments are oxygenated to great depths yet have low levels of organic matter and …

Isolation and characteristics of two heterotrophic nitrifying and aerobic denitrifying bacteria, Achromobacter sp. strain HNDS-1 and Enterobacter sp. strain HNDS-6

X Liu, Q Zhang, X Yang, D Wu, Y Li, H Di - Environmental Research, 2023 - Elsevier
In order to solve nitrogen pollution in environmental water, two heterotrophic nitrifying and
aerobic denitrifying strains isolated from acid paddy soil were identified as Achromobacter …

BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation

CC Laczny, C Kiefer, V Galata, T Fehlmann… - Nucleic acids …, 2017 - academic.oup.com
Metagenomics-based studies of mixed microbial communities are impacting biotechnology,
life sciences and medicine. Computational binning of metagenomic data is a powerful …

Survival of the fewest: Microbial dormancy and maintenance in marine sediments through deep time

JA Bradley, JP Amend, DE LaRowe - Geobiology, 2019 - Wiley Online Library
Microorganisms buried in marine sediments are known to endure starvation over geologic
timescales. However, the mechanisms of how these microorganisms cope with prolonged …

Choline degradation in Paracoccus denitrificans: identification of sources of formaldehyde

T Parekh, M Tsai, S Spiro - Journal of Bacteriology, 2024 - Am Soc Microbiol
Paracoccus denitrificans is a facultative methylotroph that can grow on methanol and
methylamine as sole sources of carbon and energy. Both are oxidized to formaldehyde and …

[HTML][HTML] Predominance of viable spore-forming piezophilic bacteria in high-pressure enrichment cultures from~ 1.5 to 2.4 km-deep coal-bearing sediments below the …

J Fang, C Kato, GM Runko, Y Nogi, T Hori, J Li… - Frontiers in …, 2017 - frontiersin.org
Phylogenetically diverse microorganisms have been observed in marine subsurface
sediments down to~ 2.5 km below the seafloor (kmbsf). However, very little is known about …

Exploring microbial activity in low-pressure environments

P Schwendner, AC Schuerger - Current Issues in Molecular Biology, 2020 - mdpi.com
The importance of hypopiezophilic and hypopiezotolerant microorganisms (ie, life that grows
at low atmospheric pressures; see section 2) in the field of astrobiology cannot be …

Key enzymes, functional genes, and metabolic pathways of the nitrogen removal-related microorganisms

C Zheng, T He, C Wang, M Zhang… - Critical Reviews in …, 2024 - Taylor & Francis
Biological nitrogen removal is a classic technique for removing nitrogen from wastewater
that has been studied extensively and gives high nitrogen removal rate, energy efficiency …

[HTML][HTML] Depth wide distribution and metabolic potential of chemolithoautotrophic microorganisms reactivated from deep continental granitic crust underneath the …

S Mandal, H Bose, K Ramesh, RP Sahu… - Frontiers in …, 2022 - frontiersin.org
Characterization of inorganic carbon (C) utilizing microorganisms from deep crystalline
rocks is of major scientific interest owing to their crucial role in global carbon and other …