Application of the Burrows-Wheeler transform for searching for approximate tandem repeats
A Danek, R Pokrzywa, I Makałowska… - Pattern Recognition in …, 2012 - Springer
Tandem repeats (TRs) are contiguous copies of repeating patterns, which may be either
exact or approximate. Approximate tandem repeats (ATRs) in a genomic sequences are …
exact or approximate. Approximate tandem repeats (ATRs) in a genomic sequences are …
Approximate Tandem Repeats Computation
T Butrak, S Chairungsee - … of the 2017 International Conference on …, 2017 - dl.acm.org
In this paper, we present a linear-time algorithm to compute approximate tandem repeat in
genomic sequences with the Longest Previous non-overlapping Factor (LPnF) table. The …
genomic sequences with the Longest Previous non-overlapping Factor (LPnF) table. The …