Advances and challenges in time-resolved macromolecular crystallography

G Brändén, R Neutze - Science, 2021 - science.org
BACKGROUND Conformational changes are essential for the correct functioning of
biological macromolecules. Time-resolved x-ray crystallography extends an extremely …

Linac coherent light source: The first five years

C Bostedt, S Boutet, DM Fritz, Z Huang, HJ Lee… - Reviews of Modern …, 2016 - APS
A new scientific frontier opened in 2009 with the start of operations of the world's first x-ray
free-electron laser (FEL), the Linac Coherent Light Source (LCLS), at SLAC National …

Protein structure prediction has reached the single-structure frontier

TJ Lane - Nature Methods, 2023 - nature.com
Dramatic advances in protein structure prediction have sparked debate as to whether the
problem of predicting structure from sequence is solved or not. Here, I argue that AlphaFold2 …

New Insights into the Cooperativity and Dynamics of Dimeric Enzymes

KW Chen, TY Sun, YD Wu - Chemical Reviews, 2023 - ACS Publications
A survey of protein databases indicates that the majority of enzymes exist in oligomeric
forms, with about half of those found in the UniProt database being homodimeric …

Room-temperature crystallography reveals altered binding of small-molecule fragments to PTP1B

TS Mehlman, JT Biel, SM Azeem, ER Nelson… - Elife, 2023 - elifesciences.org
Much of our current understanding of how small-molecule ligands interact with proteins
stems from X-ray crystal structures determined at cryogenic (cryo) temperature. For proteins …

X-ray free-electron lasers for the structure and dynamics of macromolecules

HN Chapman - Annual review of biochemistry, 2019 - annualreviews.org
X-ray free-electron lasers provide femtosecond-duration pulses of hard X-rays with a peak
brightness approximately one billion times greater than is available at synchrotron radiation …

Entropy in molecular recognition by proteins

JA Caro, KW Harpole, V Kasinath… - Proceedings of the …, 2017 - National Acad Sciences
Molecular recognition by proteins is fundamental to molecular biology. Dissection of the
thermodynamic energy terms governing protein–ligand interactions has proven difficult, with …

An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering

DA Keedy, ZB Hill, JT Biel, E Kang, TJ Rettenmaier… - Elife, 2018 - elifesciences.org
Allostery is an inherent feature of proteins, but it remains challenging to reveal the
mechanisms by which allosteric signals propagate. A clearer understanding of this intrinsic …

Harnessing conformational plasticity to generate designer enzymes

RM Crean, JM Gardner… - Journal of the American …, 2020 - ACS Publications
Recent years have witnessed an explosion of interest in understanding the role of
conformational dynamics both in the evolution of new enzymatic activities from existing …

Macromolecular room temperature crystallography

M Fischer - Quarterly Reviews of Biophysics, 2021 - cambridge.org
X-ray crystallography enables detailed structural studies of proteins to understand and
modulate their function. Conducting crystallographic experiments at cryogenic temperatures …