A benchmark study of deep learning-based multi-omics data fusion methods for cancer

D Leng, L Zheng, Y Wen, Y Zhang, L Wu, J Wang… - Genome biology, 2022 - Springer
Background A fused method using a combination of multi-omics data enables a
comprehensive study of complex biological processes and highlights the interrelationship of …

A privacy-preserving social computing framework for health management using federated learning

Z Shen, F Ding, Y Yao, A Bhardwaj… - IEEE Transactions on …, 2022 - ieeexplore.ieee.org
Currently, health management driven by intelligent means is a general demand of social
systems. Although a number of researchers have paid attention to such areas, they have …

Discrepancy and gradient-guided multi-modal knowledge distillation for pathological glioma grading

X Xing, Z Chen, M Zhu, Y Hou, Z Gao… - … Conference on Medical …, 2022 - Springer
The fusion of multi-modal data, eg, pathology slides and genomic profiles, can provide
complementary information and benefit glioma grading. However, genomic profiles are …

A survey on multi-omics-based cancer diagnosis using machine learning with the potential application in gastrointestinal cancer

S Wang, S Wang, Z Wang - Frontiers in Medicine, 2023 - frontiersin.org
Gastrointestinal cancer is becoming increasingly common, which leads to over 3 million
deaths every year. No typical symptoms appear in the early stage of gastrointestinal cancer …

Pathformer: a biological pathway informed transformer for disease diagnosis and prognosis using multi-omics data

X Liu, Y Tao, Z Cai, P Bao, H Ma, K Li, M Li… - …, 2024 - academic.oup.com
Motivation Multi-omics data provide a comprehensive view of gene regulation at multiple
levels, which is helpful in achieving accurate diagnosis of complex diseases like cancer …

Classifying breast cancer using multi-view graph neural network based on multi-omics data

Y Ren, Y Gao, W Du, W Qiao, W Li, Q Yang… - Frontiers in …, 2024 - frontiersin.org
Introduction: As the evaluation indices, cancer grading and subtyping have diverse clinical,
pathological, and molecular characteristics with prognostic and therapeutic implications …

Comprehensive learning and adaptive teaching: Distilling multi-modal knowledge for pathological glioma grading

X Xing, M Zhu, Z Chen, Y Yuan - Medical Image Analysis, 2024 - Elsevier
The fusion of multi-modal data, eg, pathology slides and genomic profiles, can provide
complementary information and benefit glioma grading. However, genomic profiles are …

Graph Contrastive Learning for Multi-omics Data

N Rajadhyaksha, A Chitkara - arXiv preprint arXiv:2301.02242, 2023 - arxiv.org
Advancements in technologies related to working with omics data require novel computation
methods to fully leverage information and help develop a better understanding of human …

iMVAN: integrative multimodal variational autoencoder and network fusion for biomarker identification and cancer subtype classification

A Dhillon, A Singh, VK Bhalla - Applied Intelligence, 2023 - Springer
Numerous research has been conducted to define the molecular and clinical aspects of
various tumors from a multi-omics point of view. However, there are significant obstacles in …

Improving context and syntactic dependency for aspect-based sentiment analysis using a fused graph attention network

P Wang, Z Zhao - Evolutionary Intelligence, 2024 - Springer
Aspect-based sentiment analysis is a hot research issue, which aims to determine the
polarity of sentiments in a particular aspect of a review. Some recent methods adopt …