Whole-genome regression and prediction methods applied to plant and animal breeding
G de Los Campos, JM Hickey, R Pong-Wong… - Genetics, 2013 - academic.oup.com
Genomic-enabled prediction is becoming increasingly important in animal and plant
breeding and is also receiving attention in human genetics. Deriving accurate predictions of …
breeding and is also receiving attention in human genetics. Deriving accurate predictions of …
Genomic prediction in animals and plants: simulation of data, validation, reporting, and benchmarking
HD Daetwyler, MPL Calus, R Pong-Wong… - Genetics, 2013 - academic.oup.com
The genomic prediction of phenotypes and breeding values in animals and plants has
developed rapidly into its own research field. Results of genomic prediction studies are often …
developed rapidly into its own research field. Results of genomic prediction studies are often …
Single Step, a general approach for genomic selection
Genomic evaluation methods assume that the reference population is genotyped and
phenotyped. This is most often false and the generation of pseudo-phenotypes is uncertain …
phenotyped. This is most often false and the generation of pseudo-phenotypes is uncertain …
Will genomic selection be a practical method for plant breeding?
A Nakaya, SN Isobe - Annals of botany, 2012 - academic.oup.com
Background Genomic selection or genome-wide selection (GS) has been highlighted as a
new approach for marker-assisted selection (MAS) in recent years. GS is a form of MAS that …
new approach for marker-assisted selection (MAS) in recent years. GS is a form of MAS that …
A class of Bayesian methods to combine large numbers of genotyped and non-genotyped animals for whole-genome analyses
Background To obtain predictions that are not biased by selection, the conditional mean of
the breeding values must be computed given the data that were used for selection. When …
the breeding values must be computed given the data that were used for selection. When …
Potential of promotion of alleles by genome editing to improve quantitative traits in livestock breeding programs
Background Genome editing (GE) is a method that enables specific nucleotides in the
genome of an individual to be changed. To date, use of GE in livestock has focussed on …
genome of an individual to be changed. To date, use of GE in livestock has focussed on …
The impact of population structure on genomic prediction in stratified populations
Key message Impacts of population structure on the evaluation of genomic heritability and
prediction were investigated and quantified using high-density markers in diverse panels in …
prediction were investigated and quantified using high-density markers in diverse panels in …
Improving genetic gain with genomic selection in autotetraploid potato
Potato (Solanum tuberosum L.) breeders consider a large number of traits during cultivar
development and progress in conventional breeding can be slow. There is accumulating …
development and progress in conventional breeding can be slow. There is accumulating …
Accuracy of pedigree and genomic predictions of carcass and novel meat quality traits in multi-breed sheep data assessed by cross-validation
Background Genomic predictions can be applied early in life without impacting selection
candidates. This is especially useful for meat quality traits in sheep. Carcass and novel meat …
candidates. This is especially useful for meat quality traits in sheep. Carcass and novel meat …
Applied animal genomics: results from the field
AL Van Eenennaam, KA Weigel… - Annu. Rev. Anim …, 2014 - annualreviews.org
Genomic selection (GS) is the use of statistical methods to estimate the genetic merit of a
genotyped animal based on prediction equations derived from large ancestral populations …
genotyped animal based on prediction equations derived from large ancestral populations …