Mycobiome diversity: high-throughput sequencing and identification of fungi
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
The hidden world within plants: ecological and evolutionary considerations for defining functioning of microbial endophytes
All plants are inhabited internally by diverse microbial communities comprising bacterial,
archaeal, fungal, and protistic taxa. These microorganisms showing endophytic lifestyles …
archaeal, fungal, and protistic taxa. These microorganisms showing endophytic lifestyles …
[HTML][HTML] Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …
second largest group of organisms based on global richness estimates, with around 3 …
PICRUSt2: An improved and extensible approach for metagenome inference
One major limitation of microbial community marker gene sequencing is that it does not
provide direct information on the functional composition of sampled communities. Here, we …
provide direct information on the functional composition of sampled communities. Here, we …
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
RH Nilsson, KH Larsson, AFS Taylor… - Nucleic acids …, 2019 - academic.oup.com
Abstract UNITE (https://unite. ut. ee/) is a web-based database and sequence management
environment for the molecular identification of fungi. It targets the formal fungal barcode—the …
environment for the molecular identification of fungi. It targets the formal fungal barcode—the …
[HTML][HTML] Microbial interkingdom interactions in roots promote Arabidopsis survival
Roots of healthy plants are inhabited by soil-derived bacteria, fungi, and oomycetes that
have evolved independently in distinct kingdoms of life. How these microorganisms interact …
have evolved independently in distinct kingdoms of life. How these microorganisms interact …
High-throughput sequencing view on the magnitude of global fungal diversity
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
[HTML][HTML] Ecological memory of recurrent drought modifies soil processes via changes in soil microbial community
Climate change is altering the frequency and severity of drought events. Recent evidence
indicates that drought may produce legacy effects on soil microbial communities. However, it …
indicates that drought may produce legacy effects on soil microbial communities. However, it …
[HTML][HTML] A meta-analysis of global fungal distribution reveals climate-driven patterns
The evolutionary and environmental factors that shape fungal biogeography are
incompletely understood. Here, we assemble a large dataset consisting of previously …
incompletely understood. Here, we assemble a large dataset consisting of previously …
[HTML][HTML] Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
The herbivore digestive tract is home to a complex community of anaerobic microbes that
work together to break down lignocellulose. These microbiota are an untapped resource of …
work together to break down lignocellulose. These microbiota are an untapped resource of …