[HTML][HTML] Modelling of compound combination effects and applications to efficacy and toxicity: state-of-the-art, challenges and perspectives

KC Bulusu, R Guha, DJ Mason, RPI Lewis… - Drug discovery today, 2016 - Elsevier
Highlights•Review of the state-of-the-art in the field of compound combination modelling.•
Significance of quality control of large-scale combination screening data.•Strategies for …

A systematic literature review for the prediction of anticancer drug response using various machine‐learning and deep‐learning techniques

DP Singh, B Kaushik - Chemical Biology & Drug Design, 2023 - Wiley Online Library
Computational methods have gained prominence in healthcare research. The accessibility
of healthcare data has greatly incited academicians and researchers to develop executions …

NeRD: a multichannel neural network to predict cellular response of drugs by integrating multidimensional data

X Cheng, C Dai, Y Wen, X Wang, X Bo, S He, S Peng - BMC medicine, 2022 - Springer
Background Considering the heterogeneity of tumors, it is a key issue in precision medicine
to predict the drug response of each individual. The accumulation of various types of drug …

Algorithms for drug sensitivity prediction

C De Niz, R Rahman, X Zhao, R Pal - Algorithms, 2016 - mdpi.com
Precision medicine entails the design of therapies that are matched for each individual
patient. Thus, predictive modeling of drug responses for specific patients constitutes a …

Predicting cancer drug response in vivo by learning an optimal feature selection of tumour molecular profiles

LC Nguyen, S Naulaerts, A Bruna, G Ghislat… - Biomedicines, 2021 - mdpi.com
(1) Background: Inter-tumour heterogeneity is one of cancer's most fundamental features.
Patient stratification based on drug response prediction is hence needed for effective anti …

Identification of drug candidates and repurposing opportunities through compound–target interaction networks

A Cichonska, J Rousu, T Aittokallio - Expert opinion on drug …, 2015 - Taylor & Francis
Introduction: System-wide identification of both on-and off-targets of chemical probes
provides improved understanding of their therapeutic potential and possible adverse effects …

DWUT-MLP: Classification of anticancer drug response using various feature selection and classification techniques

DP Singh, A Gupta, B Kaushik - Chemometrics and Intelligent Laboratory …, 2022 - Elsevier
Drug response classification constitutes a major challenge in personalized medicine. The
suitable drug selection for cancer patients is substantial and the drug response prediction is …

CTDN (convolutional temporal based deep‐neural network): an improvised stacked hybrid computational approach for anticancer drug response prediction

DP Singh, B Kaushik - Computational Biology and Chemistry, 2023 - Elsevier
The characterization of drug-metabolizing enzymes is a significant problem for customized
therapy. It is important to choose the right drugs for cancer victims, and the ability to forecast …

Genetic interaction-based biomarkers identification for drug resistance and sensitivity in cancer cells

Y Han, C Wang, Q Dong, T Chen, F Yang, Y Liu… - … Therapy-Nucleic Acids, 2019 - cell.com
Cancer cells generally harbor hundreds of alterations in the cancer genomes and act as
crucial factors in the development and progression of cancer. Gene alterations in the cancer …

Probabilistic modeling of personalized drug combinations from integrated chemical screen and molecular data in sarcoma

NE Berlow, R Rikhi, M Geltzeiler, J Abraham… - BMC cancer, 2019 - Springer
Background Cancer patients with advanced disease routinely exhaust available clinical
regimens and lack actionable genomic medicine results, leaving a large patient population …