Stochasticity in genetics and gene regulation

V van Heyningen - … Transactions of the Royal Society B, 2024 - royalsocietypublishing.org
Development from fertilized egg to functioning multi-cellular organism requires precision.
There is no precision, and often no survival, without plasticity. Plasticity is conferred partly by …

A comparative analysis of mouse imprinted and random X-chromosome inactivation

RM Malcore, S Kalantry - Epigenomes, 2024 - mdpi.com
The mammalian sexes are distinguished by the X and Y chromosomes. Whereas males
harbor one X and one Y chromosome, females harbor two X chromosomes. To equalize X …

Analgesic targets identified in mouse sensory neuron somata and terminal pain translatomes

MA Bangash, C Cubuk, F Iseppon, R Haroun, C Garcia… - Cell Reports, 2024 - cell.com
The relationship between transcription and protein expression is complex. We identified
polysome-associated RNA transcripts in the somata and central terminals of mouse sensory …

X-linked Charcot Marie Tooth mutations alter CO2 sensitivity of connexin32 hemichannels

J Butler, N Dale - Frontiers in Cellular Neuroscience, 2023 - frontiersin.org
Connexin32 (Cx32) is expressed in myelinating Schwann cells. It forms both reflexive gap
junctions, to facilitate transfer of molecules from the outer to the inner myelin layers and …

Compensation of gene dosage on the mammalian X

D Cecalev, B Viçoso, R Galupa - Development, 2024 - journals.biologists.com
Changes in gene dosage can have tremendous evolutionary potential (eg whole-genome
duplications), but without compensatory mechanisms, they can also lead to gene …

[HTML][HTML] A critical role for X-chromosome architecture in mammalian X-chromosome dosage compensation

I Dror, T Tan, K Plath - Current Opinion in Genetics & Development, 2024 - Elsevier
Highlights•XIST first mediates dampening, then silencing of X-linked genes in human
development•Complete gene silencing on the inactive X requires chromatin …

Set2 and H3K36 regulate the Drosophila male X chromosome in a context-specific manner, independent from MSL complex spreading

HR Salzler, V Vandadi, JR Sallean, AG Matera - Genetics, 2024 - academic.oup.com
Dosage compensation in Drosophila involves upregulating male X-genes two-fold. This
process is carried out by the MSL (male-specific lethal) complex, which binds high-affinity …

[HTML][HTML] Epigenomic landscape of the human dorsal root ganglion: sex differences and transcriptional regulation of nociceptive genes

Ú Franco-Enzástiga, NN Inturi, K Natarajan… - …, 2024 - pmc.ncbi.nlm.nih.gov
Gene expression is influenced by chromatin architecture via controlled access of regulatory
factors to DNA. To better understand gene regulation in the human dorsal root ganglion …

Reporter CRISPR screens decipher cis-and trans-regulatory principles at the Xist locus

T Schwaemmle, G Noviello, E Kanata, JJ Froehlich… - bioRxiv, 2024 - biorxiv.org
Developmental genes are controlled by an ensemble of cis-acting regulatory elements
(REs), which in turn respond to multiple trans-acting transcription factors (TFs) …

Antisense transcription can induce expression memory via stable promoter repression

V Mutzel, T Schwämmle, S Oeverdieck, L Librenjak… - bioRxiv, 2024 - biorxiv.org
The capacity of cells to retain a memory of previous signals enables them to adopt unique
cell fates and adjust to their surrounding environment. The underlying gene expression …