mRNAs, proteins and the emerging principles of gene expression control

C Buccitelli, M Selbach - Nature Reviews Genetics, 2020 - nature.com
Gene expression involves transcription, translation and the turnover of mRNAs and proteins.
The degree to which protein abundances scale with mRNA levels and the implications in …

On the dependency of cellular protein levels on mRNA abundance

Y Liu, A Beyer, R Aebersold - Cell, 2016 - cell.com
The question of how genomic information is expressed to determine phenotypes is of central
importance for basic and translational life science research and has been studied by …

Dynamics of translation of single mRNA molecules in vivo

X Yan, TA Hoek, RD Vale, ME Tanenbaum - Cell, 2016 - cell.com
Regulation of mRNA translation, the process by which ribosomes decode mRNAs into
polypeptides, is used to tune cellular protein levels. Currently, methods for observing the …

Proteome turnover in the spotlight: approaches, applications, and perspectives

AB Ross, JD Langer, M Jovanovic - Molecular & Cellular Proteomics, 2021 - ASBMB
In all cells, proteins are continuously synthesized and degraded to maintain protein
homeostasis and modify gene expression levels in response to stimuli. Collectively, the …

[HTML][HTML] Single-cell quantification of ribosome occupancy in early mouse development

H Ozadam, T Tonn, CM Han, A Segura, I Hoskins… - Nature, 2023 - nature.com
Translation regulation is critical for early mammalian embryonic development. However,
previous studies had been restricted to bulk measurements, precluding precise …

Protein expression landscape of mouse embryos during pre-implantation development

Y Gao, X Liu, B Tang, C Li, Z Kou, L Li, W Liu, Y Wu… - Cell reports, 2017 - cell.com
Pre-implantation embryo development is an intricate and precisely regulated process
orchestrated by maternally inherited proteins and newly synthesized proteins following …

Pervasive, coordinated protein-level changes driven by transcript isoform switching during meiosis

Z Cheng, GM Otto, EN Powers, A Keskin, P Mertins… - Cell, 2018 - cell.com
To better understand the gene regulatory mechanisms that program developmental
processes, we carried out simultaneous genome-wide measurements of mRNA, translation …

Ribosome heterogeneity and specialization in development

K Norris, T Hopes, JL Aspden - Wiley interdisciplinary reviews …, 2021 - Wiley Online Library
Regulation of protein synthesis is a vital step in controlling gene expression, especially
during development. Over the last 10 years, it has become clear that rather than being …

Xenopus: an undervalued model organism to study and model human genetic disease

M Blum, T Ott - Cells Tissues Organs, 2019 - karger.com
The function of normal and defective candidate genes for human genetic diseases, which
are rapidly being identified in large numbers by human geneticists and the biomedical …

Deciphering metabolic heterogeneity by single-cell analysis

TMJ Evers, M Hochane, SJ Tans, RMA Heeren… - 2019 - ACS Publications
Single-cell analysis provides insights into cellular heterogeneity and dynamics of individual
cells. This Feature highlights recent developments in key analytical techniques suited for …