Bayesian statistics and modelling

R van de Schoot, S Depaoli, R King, B Kramer… - Nature Reviews …, 2021 - nature.com
Bayesian statistics is an approach to data analysis based on Bayes' theorem, where
available knowledge about parameters in a statistical model is updated with the information …

Spatial memory and animal movement

WF Fagan, MA Lewis, M Auger‐Méthé, T Avgar… - Ecology …, 2013 - Wiley Online Library
Memory is critical to understanding animal movement but has proven challenging to study.
Advances in animal tracking technology, theoretical movement models and cognitive …

ctmm: an r package for analyzing animal relocation data as a continuous‐time stochastic process

JM Calabrese, CH Fleming… - Methods in Ecology and …, 2016 - Wiley Online Library
Movement ecology has developed rapidly over the past decade, driven by advances in
tracking technology that have largely removed data limitations. Development of rigorous …

momentuHMM: R package for generalized hidden Markov models of animal movement

BT McClintock, T Michelot - Methods in Ecology and Evolution, 2018 - Wiley Online Library
Discrete‐time hidden Markov models (HMMs) have become an immensely popular tool for
inferring latent animal behaviours from telemetry data. While movement HMMs typically rely …

[图书][B] Animal movement: statistical models for telemetry data

MB Hooten, DS Johnson, BT McClintock, JM Morales - 2017 - taylorfrancis.com
The study of animal movement has always been a key element in ecological science,
because it is inherently linked to critical processes that scale from individuals to populations …

Uncovering ecological state dynamics with hidden Markov models

BT McClintock, R Langrock, O Gimenez, E Cam… - Ecology …, 2020 - Wiley Online Library
Ecological systems can often be characterised by changes among a finite set of underlying
states pertaining to individuals, populations, communities or entire ecosystems through time …

A guide to state–space modeling of ecological time series

M Auger‐Méthé, K Newman, D Cole… - Ecological …, 2021 - Wiley Online Library
State–space models (SSMs) are an important modeling framework for analyzing ecological
time series. These hierarchical models are commonly used to model population dynamics …

[图书][B] Hidden Markov models for time series: an introduction using R

W Zucchini, IL MacDonald - 2009 - taylorfrancis.com
Reveals How HMMs Can Be Used as General-Purpose Time Series ModelsImplements all
methods in RHidden Markov Models for Time Series: An Introduction Using R applies …

Hidden Markov models: Pitfalls and opportunities in ecology

R Glennie, T Adam, V Leos‐Barajas… - Methods in Ecology …, 2023 - Wiley Online Library
Abstract Hidden Markov models (HMMs) and their extensions are attractive methods for
analysing ecological data where noisy, multivariate measurements are made of a hidden …

Flexible and practical modeling of animal telemetry data: hidden Markov models and extensions

R Langrock, R King, J Matthiopoulos, L Thomas… - Ecology, 2012 - Wiley Online Library
We discuss hidden Markov‐type models for fitting a variety of multistate random walks to
wildlife movement data. Discrete‐time hidden Markov models (HMMs) achieve considerable …