Trajectory of livestock genomics in South Asia: a comprehensive review

M Panigrahi, H Kumar, KA Saravanan, D Rajawat… - Gene, 2022 - Elsevier
Livestock plays a central role in sustaining human livelihood in South Asia. There are
numerous and distinct livestock species in South Asian countries. Several of them have …

Genomic tools for effective conservation of livestock breed diversity

PG Eusebi, A Martinez, O Cortes - Diversity, 2019 - mdpi.com
Human concern about the status of genetic diversity in livestock breeds and their
conservation has increased, as intense selection and reduced population sizes in many …

Single-haplotype comparative genomics provides insights into lineage-specific structural variation during cat evolution

KR Bredemeyer, LD Hillier, AJ Harris, GM Hughes… - Nature …, 2023 - nature.com
The role of structurally dynamic genomic regions in speciation is poorly understood due to
challenges inherent in diploid genome assembly. Here we reconstructed the evolutionary …

The localization of centromere protein A is conserved among tissues

E Cappelletti, FM Piras, L Sola, M Santagostino… - Communications …, 2023 - nature.com
Centromeres are epigenetically specified by the histone H3 variant CENP-A. Although
mammalian centromeres are typically associated with satellite DNA, we previously …

Genome-wide equine preimplantation genetic testing enabled by simultaneous haplotyping and copy number detection

T De Coster, Y Zhao, O Tšuiko, S Demyda-Peyrás… - Scientific Reports, 2024 - nature.com
In different species, embryonic aneuploidies and genome-wide errors are a major cause of
developmental failure. The increasing number of equine embryos being produced …

Genomics and the evolutionary history of equids

P Librado, L Orlando - Annual Review of Animal Biosciences, 2021 - annualreviews.org
The equid family contains only one single extant genus, Equus, including seven living
species grouped into horses on the one hand and zebras and asses on the other. In …

Y-Chromosomal insights into breeding history and sire line genealogies of Arabian horses

V Remer, E Bozlak, S Felkel, L Radovic, D Rigler… - Genes, 2022 - mdpi.com
The Y chromosome is a valuable genetic marker for studying the origin and influence of
paternal lineages in populations. In this study, we conducted Y-chromosomal lineage …

Horse clinical cytogenetics: recurrent themes and novel findings

M Bugno-Poniewierska, T Raudsepp - Animals, 2021 - mdpi.com
Simple Summary Horse chromosomes have been studied for veterinary diagnostic purposes
for over half a century. The findings show that changes in the chromosome number or …

Functionally annotating regulatory elements in the equine genome using histone mark ChIP-Seq

NB Kingsley, C Kern, C Creppe, EN Hales, H Zhou… - Genes, 2019 - mdpi.com
One of the primary aims of the Functional Annotation of ANimal Genomes (FAANG) initiative
is to characterize tissue-specific regulation within animal genomes. To this end, we used …

Rare and common variant discovery by whole-genome sequencing of 101 Thoroughbred racehorses

T Tozaki, A Ohnuma, M Kikuchi, T Ishige, H Kakoi… - Scientific reports, 2021 - nature.com
The Thoroughbred breed was formed by crossing Oriental horse breeds and British native
horses and is currently used in horseracing worldwide. In this study, we constructed a single …