Small RNAs in bacteria and archaea: who they are, what they do, and how they do it

EGH Wagner, P Romby - Advances in genetics, 2015 - Elsevier
Small RNAs are ubiquitously present regulators in all kingdoms of life. Most bacterial and
archaeal small RNAs (sRNAs) act by antisense mechanisms on multiple target mRNAs …

Regulation of bacterial virulence by Csr (Rsm) systems

CA Vakulskas, AH Potts, P Babitzke… - Microbiology and …, 2015 - Am Soc Microbiol
Most bacterial pathogens have the remarkable ability to flourish in the external environment
and in specialized host niches. This ability requires their metabolism, physiology, and …

[HTML][HTML] The interaction between plants and bacteria in the remediation of petroleum hydrocarbons: an environmental perspective

P Gkorezis, M Daghio, A Franzetti… - Frontiers in …, 2016 - frontiersin.org
Widespread pollution of terrestrial ecosystems with petroleum hydrocarbons (PHCs) has
generated a need for remediation and, given that many PHCs are biodegradable, bio-and …

Competing endogenous RNAs: a target-centric view of small RNA regulation in bacteria

L Bossi, N Figueroa-Bossi - Nature Reviews Microbiology, 2016 - nature.com
Many bacterial regulatory small RNAs (sRNAs) have several mRNA targets, which places
them at the centre of regulatory networks that help bacteria to adapt to environmental …

[HTML][HTML] RNA-binding proteins involved in post-transcriptional regulation in bacteria

E Van Assche, S Van Puyvelde… - Frontiers in …, 2015 - frontiersin.org
Post-transcriptional regulation is a very important mechanism to control gene expression in
changing environments. In the past decade, a lot of interest has been directed toward the …

Eliminating a global regulator of carbon catabolite repression enhances the conversion of aromatic lignin monomers to muconate in Pseudomonas putida KT2440

CW Johnson, PE Abraham, JG Linger, P Khanna… - Metabolic engineering …, 2017 - Elsevier
Carbon catabolite repression refers to the preference of microbes to metabolize certain
growth substrates over others in response to a variety of regulatory mechanisms. Such …

Direct biosynthesis of adipic acid from lignin-derived aromatics using engineered Pseudomonas putida KT2440

W Niu, H Willett, J Mueller, X He, L Kramer, B Ma… - Metabolic …, 2020 - Elsevier
Lignin is one largely untapped natural resource that can be exploited as a raw material for
the bioproduction of value-added chemicals. Meanwhile, the current petroleum-based …

Carbon catabolite repression and Impranil polyurethane degradation in Pseudomonas protegens strain Pf-5

CS Hung, S Zingarelli, LJ Nadeau… - Applied and …, 2016 - Am Soc Microbiol
Polyester polyurethane (PU) coatings are widely used to help protect underlying structural
surfaces but are susceptible to biological degradation. PUs are susceptible to degradation …

[HTML][HTML] Engineering a Pseudomonas taiwanensis 4-coumarate platform for production of para-hydroxy aromatics with high yield and specificity

B Wynands, F Kofler, A Sieberichs, N da Silva… - Metabolic …, 2023 - Elsevier
Aromatics are valuable bulk or fine chemicals with a myriad of important applications.
Currently, their vast majority is produced from petroleum associated with many negative …

Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa

E Sonnleitner, A Wulf, S Campagne, XY Pei… - Nucleic acids …, 2018 - academic.oup.com
In Pseudomonas aeruginosa the RNA chaperone Hfq and the c atabolite r epression c ontrol
protein (Crc) act as post-transcriptional regulators during carbon catabolite repression …