Alternative splicing and protein diversity: plants versus animals

S Chaudhary, W Khokhar, I Jabre, ASN Reddy… - Frontiers in plant …, 2019 - frontiersin.org
Plants, unlike animals, exhibit a very high degree of plasticity in their growth and
development and employ diverse strategies to cope with the variations during diurnal cycles …

The changing paradigm of intron retention: regulation, ramifications and recipes

G Monteuuis, JJL Wong, CG Bailey… - Nucleic acids …, 2019 - academic.oup.com
Intron retention (IR) is a form of alternative splicing that has long been neglected in
mammalian systems although it has been studied for decades in non-mammalian species …

CRISPR-mediated engineering across the central dogma in plant biology for basic research and crop improvement

D Pramanik, RM Shelake, MJ Kim, JY Kim - Molecular Plant, 2021 - cell.com
The central dogma (CD) of molecular biology is the transfer of genetic information from DNA
to RNA to protein. Major CD processes governing genetic flow include the cell cycle, DNA …

The importance of alternative splicing in adaptive evolution

P Singh, EP Ahi - 2022 - Wiley Online Library
Although alternative splicing is a ubiquitous co‐transcriptional gene regulatory mechanism
in plants, animals and fungi, its contribution to evolutionary transitions is understudied …

Alternative splicing and its roles in plant metabolism

PY Lam, L Wang, C Lo, FY Zhu - International Journal of Molecular …, 2022 - mdpi.com
Plant metabolism, including primary metabolism such as tricarboxylic acid cycle, glycolysis,
shikimate and amino acid pathways as well as specialized metabolism such as biosynthesis …

Alternative splicing in plants: Current knowledge and future directions for assessing the biological relevance of splice variants

RS Tognacca, FS Rodríguez, FE Aballay… - Journal of …, 2023 - academic.oup.com
Alternative splicing is an important regulatory process that produces multiple transcripts from
a single gene, significantly modulating the transcriptome and potentially the proteome …

Stress-induced changes in alternative splicing landscape in rice: functional significance of splice isoforms in stress tolerance

SA Ganie, ASN Reddy - Biology, 2021 - mdpi.com
Simple Summary Environmental stresses adversely affect rice production. Understanding
the molecular responses of rice to these stresses will have an enormous impact on the …

Repeated turnovers keep sex chromosomes young in willows

D Wang, Y Li, M Li, W Yang, X Ma, L Zhang, Y Wang… - Genome Biology, 2022 - Springer
Background Salicaceae species have diverse sex determination systems and frequent sex
chromosome turnovers. However, compared with poplars, the diversity of sex determination …

The crosstalk between epigenetic mechanisms and alternative RNA processing regulation

J Zhang, YZ Zhang, J Jiang, CG Duan - Frontiers in genetics, 2020 - frontiersin.org
As a co-transcriptional process, RNA processing, including alternative splicing and
alternative polyadenylation, is crucial for the generation of multiple mRNA isoforms. RNA …

Cotranscriptional RNA processing and modification in plants

S Marquardt, E Petrillo, PA Manavella - The Plant Cell, 2023 - academic.oup.com
The activities of RNA polymerases shape the epigenetic landscape of genomes with
profound consequences for genome integrity and gene expression. A fundamental event …