Stream microbial diversity in response to environmental changes: review and synthesis of existing research

LH Zeglin - Frontiers in microbiology, 2015 - frontiersin.org
The importance of microbial activity to ecosystem function in aquatic ecosystems is well
established, but microbial diversity has been less frequently addressed. This review and …

Multivariate analyses in microbial ecology

A Ramette - FEMS microbiology ecology, 2007 - academic.oup.com
Environmental microbiology is undergoing a dramatic revolution due to the increasing
accumulation of biological information and contextual environmental parameters. This will …

Strengths and limitations of 16S rRNA gene amplicon sequencing in revealing temporal microbial community dynamics

R Poretsky, LM Rodriguez-R, C Luo, D Tsementzi… - PloS one, 2014 - journals.plos.org
This study explored the short-term planktonic microbial community structure and resilience
in Lake Lanier (GA, USA) while simultaneously evaluating the technical aspects of …

The Gut Microbiota Appears to Compensate for Seasonal Diet Variation in the Wild Black Howler Monkey (Alouatta pigra)

KR Amato, SR Leigh, A Kent, RI Mackie, CJ Yeoman… - Microbial ecology, 2015 - Springer
For most mammals, including nonhuman primates, diet composition varies temporally in
response to differences in food availability. Because diet influences gut microbiota …

Coherent dynamics and association networks among lake bacterioplankton taxa

A Eiler, F Heinrich, S Bertilsson - The ISME journal, 2012 - academic.oup.com
Bacteria have important roles in freshwater food webs and in the cycling of elements in the
ecosystem. Yet specific ecological features of individual phylogenetic groups and …

A meta-analysis of changes in bacterial and archaeal communities with time

A Shade, J Gregory Caporaso, J Handelsman… - The ISME …, 2013 - academic.oup.com
Ecologists have long studied the temporal dynamics of plant and animal communities with
much less attention paid to the temporal dynamics exhibited by microbial communities. As a …

From structure to function: the ecology of host-associated microbial communities

CJ Robinson, BJM Bohannan… - … and Molecular Biology …, 2010 - Am Soc Microbiol
In the past several years, we have witnessed an increased interest in understanding the
structure and function of the indigenous microbiota that inhabits the human body. It is hoped …

Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient

CS Fortunato, L Herfort, P Zuber, AM Baptista… - The ISME …, 2012 - academic.oup.com
Few studies of microbial biogeography address variability across both multiple habitats and
multiple seasons. Here we examine the spatial and temporal variability of bacterioplankton …

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

AF Andersson, L Riemann, S Bertilsson - The ISME journal, 2010 - academic.oup.com
Variation in traits causes bacterial populations to respond in contrasting ways to
environmental drivers. Learning about this will help us understand the ecology of individual …

Regional synchrony in full-scale activated sludge bioreactors due to deterministic microbial community assembly

JS Griffin, GF Wells - The ISME journal, 2017 - academic.oup.com
Seasonal community structure and regionally synchronous population dynamics have been
observed in natural microbial ecosystems, but have not been well documented in …