How cells get the message: dynamic assembly and function of mRNA–protein complexes

M Müller-McNicoll, KM Neugebauer - Nature Reviews Genetics, 2013 - nature.com
Abstract mRNA is packaged into ribonucleoprotein particles called mRNPs. A multitude of
RNA-binding proteins as well as a host of associated proteins participate in the fate of …

NMR approaches for structural analysis of multidomain proteins and complexes in solution

C Göbl, T Madl, B Simon, M Sattler - Progress in Nuclear Magnetic …, 2014 - Elsevier
NMR spectroscopy is a key method for studying the structure and dynamics of (large)
multidomain proteins and complexes in solution. It plays a unique role in integrated …

Genetically encoded chemical crosslinking of RNA in vivo

W Sun, N Wang, H Liu, B Yu, L Jin, X Ren, Y Shen… - Nature …, 2023 - nature.com
Protein–RNA interactions regulate RNA fate and function, and defects can lead to various
disorders. Such interactions have mainly been studied by nucleoside-based UV crosslinking …

FUBP1 is a general splicing factor facilitating 3′ splice site recognition and splicing of long introns

S Ebersberger, C Hipp, MM Mulorz, A Buchbender… - Molecular cell, 2023 - cell.com
Splicing of pre-mRNAs critically contributes to gene regulation and proteome expansion in
eukaryotes, but our understanding of the recognition and pairing of splice sites during …

The role of disorder in RNA binding affinity and specificity

DSM Ottoz, LE Berchowitz - Open Biology, 2020 - royalsocietypublishing.org
Most RNA-binding modules are small and bind few nucleotides. RNA-binding proteins
typically attain the physiological specificity and affinity for their RNA targets by combining …

Deciphering the mRNP code: RNA-bound determinants of post-transcriptional gene regulation

NH Gehring, E Wahle, U Fischer - Trends in biochemical sciences, 2017 - cell.com
Eukaryotic cells determine the final protein output of their genetic program not only by
controlling transcription but also by regulating the localization, translation and turnover rates …

A coarse‐grained model for disordered and multi‐domain proteins

F Cao, S von Bülow, G Tesei… - Protein …, 2024 - Wiley Online Library
Many proteins contain more than one folded domain, and such modular multi‐domain
proteins help expand the functional repertoire of proteins. Because of their larger size and …

HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs

M Pabis, GM Popowicz, R Stehle… - Nucleic acids …, 2019 - academic.oup.com
HuR/ELAVL1 is an RNA-binding protein involved in differentiation and stress response that
acts primarily by stabilizing messenger RNA (mRNA) targets. HuR comprises three RNA …

Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences

A Jolma, J Zhang, E Mondragón, E Morgunova… - Genome …, 2020 - genome.cshlp.org
RNA-binding proteins (RBPs) regulate RNA metabolism at multiple levels by affecting
splicing of nascent transcripts, RNA folding, base modification, transport, localization …

Interdomain allostery promotes assembly of the poly (A) mRNA complex with PABP and eIF4G

N Safaee, G Kozlov, AM Noronha, J Xie, CJ Wilds… - Molecular cell, 2012 - cell.com
Many RNA-binding proteins contain multiple single-strand nucleic acid-binding domains
and assemble into large multiprotein messenger ribonucleic acid protein (mRNP) …