Applications of genotyping by sequencing in aquaculture breeding and genetics

D Robledo, C Palaiokostas, L Bargelloni… - Reviews in …, 2018 - Wiley Online Library
Selective breeding is increasingly recognized as a key component of sustainable production
of aquaculture species. The uptake of genomic technology in aquaculture breeding has …

Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research

Aquaculture Genomics, Genetics and Breeding … - BMC genomics, 2017 - Springer
Advancing the production efficiency and profitability of aquaculture is dependent upon the
ability to utilize a diverse array of genetic resources. The ultimate goals of aquaculture …

Genome‐wide association and genomic selection in aquaculture

JM Yanez, A Barria, ME Lopez, T Moen… - Reviews in …, 2023 - Wiley Online Library
Recent advancements in genomic technologies have led to the discovery and application of
DNA‐markers [eg single nucleotide polymorphisms (SNPs)] for the genetic improvement of …

Research advances in the genomics and applications for molecular breeding of aquaculture animals

X You, X Shan, Q Shi - Aquaculture, 2020 - Elsevier
High-throughput sequencing technologies have been extensively applied to genetics and
breeding in the aquaculture industry. To date, many aquaculture animal genomes have …

Genome-Wide Association Study for Identifying Loci that Affect Fillet Yield, Carcass, and Body Weight Traits in Rainbow Trout (Oncorhynchus mykiss)

D Gonzalez-Pena, G Gao, M Baranski, T Moen… - Frontiers in …, 2016 - frontiersin.org
Fillet yield (FY,%) is an economically-important trait in rainbow trout aquaculture that affects
production efficiency. Despite that, FY has received little attention in breeding programs …

Major histocompatibility complex (MHC) genes and disease resistance in fish

T Yamaguchi, JM Dijkstra - Cells, 2019 - mdpi.com
Fascinating about classical major histocompatibility complex (MHC) molecules is their
polymorphism. The present study is a review and discussion of the fish MHC situation. The …

Evaluation of genome-enabled selection for bacterial cold water disease resistance using progeny performance data in rainbow trout: insights on genotyping methods …

RL Vallejo, TD Leeds, BO Fragomeni, G Gao… - Frontiers in …, 2016 - frontiersin.org
Bacterial cold water disease (BCWD) causes significant economic losses in salmonid
aquaculture, and traditional family-based breeding programs aimed at improving BCWD …

Detection and validation of QTL affecting bacterial cold water disease resistance in rainbow trout using restriction-site associated DNA sequencing

Y Palti, RL Vallejo, G Gao, S Liu, AG Hernandez… - PloS one, 2015 - journals.plos.org
Bacterial cold water disease (BCWD) causes significant economic loss in salmonid
aquaculture. Using microsatellite markers in a genome scan, we previously detected …

Similar genetic architecture with shared and unique quantitative trait loci for bacterial cold water disease resistance in two rainbow trout breeding populations

RL Vallejo, S Liu, G Gao, BO Fragomeni… - Frontiers in …, 2017 - frontiersin.org
Bacterial cold water disease (BCWD) causes significant mortality and economic losses in
salmonid aquaculture. In previous studies, we identified moderate-large effect quantitative …

Development and validation of a SNP panel for parentage assignment in rainbow trout

S Liu, Y Palti, G Gao, CE Rexroad III - Aquaculture, 2016 - Elsevier
In salmonid aquaculture, family-based selective breeding programs rely on accurate
pedigree information for estimating genetic merits. The pedigree information can be tracked …