Variants of uncertain significance in the era of high-throughput genome sequencing: a lesson from breast and ovary cancers
G Federici, S Soddu - Journal of Experimental & Clinical Cancer Research, 2020 - Springer
The promising expectations about personalized medicine have opened the path to routine
large-scale sequencing and increased the importance of genetic counseling for hereditary …
large-scale sequencing and increased the importance of genetic counseling for hereditary …
Where genotype is not predictive of phenotype: towards an understanding of the molecular basis of reduced penetrance in human inherited disease
DN Cooper, M Krawczak, C Polychronakos… - Human genetics, 2013 - Springer
Some individuals with a particular disease-causing mutation or genotype fail to express
most if not all features of the disease in question, a phenomenon that is known as 'reduced …
most if not all features of the disease in question, a phenomenon that is known as 'reduced …
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics …
S Richards, N Aziz, S Bale, D Bick, S Das… - Genetics in …, 2015 - nature.com
Abstract Disclaimer: These ACMG Standards and Guidelines were developed primarily as
an educational resource for clinical laboratory geneticists to help them provide quality …
an educational resource for clinical laboratory geneticists to help them provide quality …
PMut: a web-based tool for the annotation of pathological variants on proteins, 2017 update
We present here a full update of the PMut predictor, active since 2005 and with a large
acceptance in the field of predicting Mendelian pathological mutations. PMut internal engine …
acceptance in the field of predicting Mendelian pathological mutations. PMut internal engine …
Sequence variant classification and reporting: recommendations for improving the interpretation of cancer susceptibility genetic test results
Genetic testing of cancer susceptibility genes is now widely applied in clinical practice to
predict risk of developing cancer. In general, sequence‐based testing of germline DNA is …
predict risk of developing cancer. In general, sequence‐based testing of germline DNA is …
Functional annotations improve the predictive score of human disease‐related mutations in proteins
R Calabrese, E Capriotti, P Fariselli… - Human …, 2009 - Wiley Online Library
Single nucleotide polymorphisms (SNPs) are the simplest and most frequent form of human
DNA variation, also valuable as genetic markers of disease susceptibility. The most …
DNA variation, also valuable as genetic markers of disease susceptibility. The most …
Bioinformatics challenges for personalized medicine
GH Fernald, E Capriotti, R Daneshjou… - …, 2011 - academic.oup.com
Motivation: Widespread availability of low-cost, full genome sequencing will introduce new
challenges for bioinformatics. Results: This review outlines recent developments in …
challenges for bioinformatics. Results: This review outlines recent developments in …
Personalized diagnosis and management of congenital cataract by next-generation sequencing
RL Gillespie, J O'Sullivan, J Ashworth, S Bhaskar… - Ophthalmology, 2014 - Elsevier
Purpose To assess the utility of integrating genomic data from next-generation sequencing
and phenotypic data to enhance the diagnosis of bilateral congenital cataract (CC). Design …
and phenotypic data to enhance the diagnosis of bilateral congenital cataract (CC). Design …
Rare variants in the ATMgene and risk of breast cancer
DE Goldgar, S Healey, JG Dowty, L Da Silva… - Breast Cancer …, 2011 - Springer
Introduction The ataxia-telangiectasia mutated (ATM) gene (MIM ID 208900) encodes a
protein kinase that plays a significant role in the activation of cellular responses to DNA …
protein kinase that plays a significant role in the activation of cellular responses to DNA …
Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed
Multiple algorithms are used to predict the impact of missense mutations on protein structure
and function using algorithm‐generated sequence alignments or manually curated …
and function using algorithm‐generated sequence alignments or manually curated …