Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
The current developments in medicinal plant genomics enabled the diversification of secondary metabolites' biosynthesis
MM Alami, Z Ouyang, Y Zhang, S Shu, G Yang… - International journal of …, 2022 - mdpi.com
Medicinal plants produce important substrates for their adaptation and defenses against
environmental factors and, at the same time, are used for traditional medicine and industrial …
environmental factors and, at the same time, are used for traditional medicine and industrial …
A graph-based genome and pan-genome variation of the model plant Setaria
Setaria italica (foxtail millet), a founder crop of East Asian agriculture, is a model plant for C4
photosynthesis and developing approaches to adaptive breeding across multiple climates …
photosynthesis and developing approaches to adaptive breeding across multiple climates …
A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci
Wild and weedy relatives of domesticated crops harbor genetic variants that can advance
agricultural biotechnology. Here we provide a genome resource for the wild plant green …
agricultural biotechnology. Here we provide a genome resource for the wild plant green …
Multi-omics analyses of 398 foxtail millet accessions reveal genomic regions associated with domestication, metabolite traits, and anti-inflammatory effects
Foxtail millet (Setaria italica), which was domesticated from the wild species green foxtail
(Setaria viridis), is a rich source of phytonutrients for humans. To evaluate how breeding …
(Setaria viridis), is a rich source of phytonutrients for humans. To evaluate how breeding …
Orphan crops and their wild relatives in the genomic era
CY Ye, L Fan - Molecular Plant, 2021 - cell.com
More than half of the calories consumed by humans are provided by three major cereal
crops (rice, maize, and wheat). Orphan crops are usually well adapted to low-input …
crops (rice, maize, and wheat). Orphan crops are usually well adapted to low-input …
Beyond a reference genome: pangenomes and population genomics of underutilized and orphan crops for future food and nutrition security
MA Chapman, Y He, M Zhou - New Phytologist, 2022 - Wiley Online Library
Underutilized crops are, by definition, under‐researched compared to staple crops yet come
with traits that may be especially important given climate change and the need to feed a …
with traits that may be especially important given climate change and the need to feed a …
High light and temperature reduce photosynthetic efficiency through different mechanisms in the C4 model Setaria viridis
CM Anderson, EM Mattoon, N Zhang, E Becker… - Communications …, 2021 - nature.com
C4 plants frequently experience high light and high temperature conditions in the field,
which reduce growth and yield. However, the mechanisms underlying these stress …
which reduce growth and yield. However, the mechanisms underlying these stress …
Plasma membrane aquaporins regulate root hydraulic conductivity in the model plant Setaria viridis
A Gal, A Dalal, M Anfang, D Sharma… - Plant …, 2023 - academic.oup.com
The high rate of productivity observed in panicoid crops is in part due to their extensive root
system. Recently, green foxtail (Setaria viridis) has emerged as a genetic model system for …
system. Recently, green foxtail (Setaria viridis) has emerged as a genetic model system for …
DNA-free high-quality RNA extraction from 39 difficult-to-extract plant species (representing seasonal tissues and tissue types) of 32 families, and its validation for …
S Sasi, S Krishnan, P Kodackattumannil, AAL Shamisi… - Plant Methods, 2023 - Springer
Background High-purity RNA serves as the basic requirement for downstream molecular
analysis of plant species, especially the differential expression of genes to various biotic and …
analysis of plant species, especially the differential expression of genes to various biotic and …