General theory for multiple input-output perturbations in complex molecular systems. 1. Linear QSPR electronegativity models in physical, organic, and medicinal …

H Gonzalez-Diaz, S Arrasate… - Current topics in …, 2013 - ingentaconnect.com
In general perturbation methods starts with a known exact solution of a problem and add
“small” variation terms in order to approach to a solution for a related problem without known …

In silico design of novel PIN1 inhibitors by combined of 3D-QSAR, molecular docking, molecular dynamic simulation and ADMET studies

K Tabti, L Elmchichi, A Sbai, H Maghat… - Journal of Molecular …, 2022 - Elsevier
Due to the role of enzyme PIN1 in cancer cells, PIN1 is a promising therapeutic target. The
study of the mechanism between PIN1 and thiazole inhibitors was carried out operating 3D …

Review of MARCH-INSIDE & complex networks prediction of drugs: ADMET, anti-parasite activity, metabolizing enzymes and cardiotoxicity proteome biomarkers

H Gonzalez-Diaz, A Duardo-Sanchez… - Current Drug …, 2010 - benthamdirect.com
In this communication we carry out an in-depth review of a very versatile QSPR-like method.
The method name is MARCH-INSIDE (MARkov CHains Ivariants for Network Selection and …

Get with the program: Software-driven innovation in traditional manufacturing

LG Branstetter, M Drev, N Kwon - Management Science, 2019 - pubsonline.informs.org
This paper documents the increasing importance of software for successful innovation in
manufacturing sectors well beyond the traditional definition of electronics and information …

Combined QSAR, molecular docking and molecular dynamics study on new Acetylcholinesterase and Butyrylcholinesterase inhibitors

I Daoud, N Melkemi, T Salah, S Ghalem - Computational biology and …, 2018 - Elsevier
Background and purpose This work deals with several molecular modeling methods used to
discover new therapeutic agents for treating the Alzheimer's disease (AD). The cholinergic …

MIND-BEST: Web Server for Drugs and Target Discovery; Design, Synthesis, and Assay of MAO-B Inhibitors and Theoretical− Experimental Study of G3PDH Protein …

H González-Díaz, F Prado-Prado… - Journal of proteome …, 2011 - ACS Publications
Many drugs with very different affinity to a large number of receptors are described. Thus, in
this work, we selected drug− target pairs (DTPs/nDTPs) of drugs with high affinity/nonaffinity …

First report on interspecies quantitative correlation of ecotoxicity of pharmaceuticals

S Kar, K Roy - Chemosphere, 2010 - Elsevier
Pharmaceuticals being extensively and progressively used in human and veterinary
medicine are emerging as significant environmental contaminants. Pharmaceuticals are …

2D QSAR, design, docking study and ADMET of some N-aryl derivatives concerning inhibitory activity against Alzheimer disease

A Ajala, A Uzairu, GA Shallangwa… - Future Journal of …, 2022 - Springer
Background Alzheimer disease (AD) is an ailment that disturbs mainly people of old age.
The fundamental remedial way to deal with AD depends on the utilization of AChEI. The …

Prediction of Enzyme Classes from 3D Structure: A General Model and Examples of Experimental-Theoretic Scoring of Peptide Mass Fingerprints of Leishmania …

R Concu, MA Dea-Ayuela… - Journal of Proteome …, 2009 - ACS Publications
The number of protein and peptide structures included in Protein Data Bank (PDB) and Gen
Bank without functional annotation has increased. Consequently, there is a high demand for …

Using entropy of drug and protein graphs to predict FDA drug-target network: theoretic-experimental study of MAO inhibitors and hemoglobin peptides from Fasciola …

F Prado-Prado, X García-Mera, P Abeijón… - European journal of …, 2011 - Elsevier
There are many drugs described with very different affinity to a large number of receptors. In
this work, we selected Drug-Target pairs (DTPs/nDTPs) of drugs with high affinity/non-affinity …