Process simulation of complex biological pathways in physical reactive space and reformulated for massively parallel computing platforms
Biological systems encompass complexity that far surpasses many artificial systems.
Modeling and simulation of large and complex biochemical pathways is a computationally …
Modeling and simulation of large and complex biochemical pathways is a computationally …
A-MapCG: an adaptive MapReduce framework for GPUs
L Liu, Y Zhang, M Liu, C Wang… - … Architecture, and Storage …, 2017 - ieeexplore.ieee.org
The MapReduce framework proposed by Google to process large data sets is an efficient
framework used in many areas, such as social network, scientific research, electronic …
framework used in many areas, such as social network, scientific research, electronic …
Compile-time automatic synchronization insertion and redundant synchronization elimination for GPU kernels
L Liu, M Liu, CJ Wang, J Wang - 2016 IEEE 22nd International …, 2016 - ieeexplore.ieee.org
In most of the GPU kernel programs, the synchronization statements are inserted manually
by the programmers, which is very labor intensive, and error-prone. In this paper, we …
by the programmers, which is very labor intensive, and error-prone. In this paper, we …
Simulation of complex biochemical pathways in 3D process space via heterogeneous computing platform: Preliminary results
J Li, A Salighehdar, N Ganesan - … , ARC 2014, Vilamoura, Portugal, April 14 …, 2014 - Springer
Biological pathways typically consist of upto hundreds of reacting chemical species and
reactions within a biological system. Modeling and simulation of biological pathways in …
reactions within a biological system. Modeling and simulation of biological pathways in …
Stability Analysis of Population Dynamics Model in Microbial Biofilms with Non-participating Strains
The existence of phenotypic heterogeneity in single-species bacterial biofilms is well-
established in the published literature. However, the modeling of population dynamics in …
established in the published literature. However, the modeling of population dynamics in …
An Optimization Compiler Framework Based on Polyhedron Model for GPGPUs
L Liu - 2017 - corescholar.libraries.wright.edu
General purpose GPU (GPGPU) is an effective many-core architecture that can yield high
throughput for many scientific applications with thread-level parallelism. However, several …
throughput for many scientific applications with thread-level parallelism. However, several …
Process simulation of complex biochemical pathways in explicit 3d space enabled by heterogeneous computing platform
J Li, A Salighehdar, N Ganesan - 2014 IEEE International …, 2014 - ieeexplore.ieee.org
Biological pathways typically consist of dozens of reacting chemical species and hundreds
of equations describing reactions within the biological system. Modeling and simulation of …
of equations describing reactions within the biological system. Modeling and simulation of …
[PDF][PDF] A Compiler-assisted locality aware CTA Mapping Scheme.
L Liu, M Liu, C Wang - CATA, 2019 - easychair.org
General purpose GPU (GPGPU) is an effective many-core architecture that can yield high
throughput for many scientific applications with thread-level parallelism. However, several …
throughput for many scientific applications with thread-level parallelism. However, several …
Safeguarding abila through multiple data perspectives VAST 2014 Grand Challenge award: Effective analysis and presentation
We introduce a system for visual analysis of news articles, emails, GPS tracking data,
financial transactions and streaming micro-blog data. This system was developed in …
financial transactions and streaming micro-blog data. This system was developed in …
[图书][B] Language design and implementation for computational modeling, simulation and visualization
V Sharma - 2015 - search.proquest.com
Computational models have become an essential tool in engineering and science. Modeling
and simulation platforms are being used to describe complex systems where the user builds …
and simulation platforms are being used to describe complex systems where the user builds …