Microbial diversity in extreme environments
WS Shu, LN Huang - Nature Reviews Microbiology, 2022 - nature.com
A wide array of microorganisms, including many novel, phylogenetically deeply rooted taxa,
survive and thrive in extreme environments. These unique and reduced-complexity …
survive and thrive in extreme environments. These unique and reduced-complexity …
Metagenomics of thermophiles with a focus on discovery of novel thermozymes
ME DeCastro, E Rodríguez-Belmonte… - Frontiers in …, 2016 - frontiersin.org
Microbial populations living in environments with temperatures above 50° C (thermophiles)
have been widely studied, increasing our knowledge in the composition and function of …
have been widely studied, increasing our knowledge in the composition and function of …
Fast and sensitive taxonomic classification for metagenomics with Kaiju
Metagenomics emerged as an important field of research not only in microbial ecology but
also for human health and disease, and metagenomic studies are performed on increasingly …
also for human health and disease, and metagenomic studies are performed on increasingly …
Bioinformatic approaches for studying the microbiome of fermented food
LH Walsh, M Coakley, AM Walsh… - Critical Reviews in …, 2023 - Taylor & Francis
High-throughput DNA sequencing-based approaches continue to revolutionise our
understanding of microbial ecosystems, including those associated with fermented foods …
understanding of microbial ecosystems, including those associated with fermented foods …
Metagenomic analysis of hot springs in Central India reveals hydrocarbon degrading thermophiles and pathways essential for survival in extreme environments
Extreme ecosystems such as hot springs are of great interest as a source of novel
extremophilic species, enzymes, metabolic functions for survival and biotechnological …
extremophilic species, enzymes, metabolic functions for survival and biotechnological …
RaFAH: Host prediction for viruses of Bacteria and Archaea based on protein content
Culture-independent approaches have recently shed light on the genomic diversity of
viruses of prokaryotes. One fundamental question when trying to understand their ecological …
viruses of prokaryotes. One fundamental question when trying to understand their ecological …
Comparative analysis of microbial diversity across temperature gradients in hot springs from Yellowstone and Iceland
PT Podar, Z Yang, SH Björnsdóttir… - Frontiers in Microbiology, 2020 - frontiersin.org
Geothermal hot springs are a natural setting to study microbial adaptation to a wide range of
temperatures reaching up to boiling. Temperature gradients lead to distinct microbial …
temperatures reaching up to boiling. Temperature gradients lead to distinct microbial …
The influence of temperature and pH on bacterial community composition of microbial mats in hot springs from Costa Rica
L Uribe‐Lorío, L Brenes-Guillén… - …, 2019 - Wiley Online Library
We used the 16S rRNA gene pyrosequencing approach to investigate the microbial diversity
and community composition in several Costa Rican hot springs alongside the latitudinal axis …
and community composition in several Costa Rican hot springs alongside the latitudinal axis …
A new symbiotic nanoarchaeote (Candidatus Nanoclepta minutus) and its host (Zestosphaera tikiterensis gen. nov., sp. nov.) from a New Zealand hot spring
Abstract Three thermophilic Nanoarchaeota-Crenarchaeota symbiotic systems have been
described. We obtained another stable anaerobic enrichment culture at 80° C, pH 6.0 from a …
described. We obtained another stable anaerobic enrichment culture at 80° C, pH 6.0 from a …
Microbial diversity and autotrophic activity in Kamchatka hot springs
AY Merkel, NV Pimenov, II Rusanov, AI Slobodkin… - Extremophiles, 2017 - Springer
Abstract Microbial communities of Kamchatka Peninsula terrestrial hot springs were studied
using molecular, radioisotopic and cultural approaches. Analysis of 16S rRNA gene …
using molecular, radioisotopic and cultural approaches. Analysis of 16S rRNA gene …