Schrödinger's microbes: tools for distinguishing the living from the dead in microbial ecosystems

JB Emerson, RI Adams, CMB Román, B Brooks… - Microbiome, 2017 - Springer
While often obvious for macroscopic organisms, determining whether a microbe is dead or
alive is fraught with complications. Fields such as microbial ecology, environmental health …

Salinity stress changed the biogeochemical controls on CH4 and N2O emissions of estuarine and intertidal sediments

X Li, D Gao, L Hou, M Liu - Science of the total environment, 2019 - Elsevier
Elevated salinity is expected to drive changes in biogeochemical cycling and microbial
communities in estuarine and intertidal wetlands. However, limited information regarding the …

Diversity and distribution of Archaea in global estuarine ecosystems

X Liu, J Pan, Y Liu, M Li, JD Gu - Science of the Total Environment, 2018 - Elsevier
Estuarine ecosystem is a unique geographical transitional zone between freshwater and
seawater, harboring a wide range of microbial communities including Archaea. Although a …

Distinct patterns of distribution, community assembly and cross-domain co-occurrence of planktonic archaea in four major estuaries of China

X Hu, Y Huang, G Gu, H Hu, H Yan, H Zhang… - Environmental …, 2023 - Springer
Background Archaea are key mediators of estuarine biogeochemical cycles, but
comprehensive studies comparing archaeal communities among multiple estuaries with …

Temporal and spatial dynamics of archaeal communities in two freshwater lakes at different trophic status

Y Yang, Y Dai, Z Wu, S Xie, Y Liu - Frontiers in Microbiology, 2016 - frontiersin.org
In either eutrophic Dianchi Lake or mesotrophic Erhai Lake, the abundance, diversity, and
structure of archaeaplankton communities in spring were different from those in summer. In …

Influences of plant type on bacterial and archaeal communities in constructed wetland treating polluted river water

Y Long, H Yi, S Chen, Z Zhang, K Cui, Y Bing… - … Science and Pollution …, 2016 - Springer
Both bacteria and archaeal communities can play important roles in biogeochemical
processes in constructed wetland (CW) system. However, the influence of plant type on …

The activity of nitrifying microorganisms in a high-altitude Andean wetland

V Molina, C Dorador, C Fernández… - FEMS microbiology …, 2018 - academic.oup.com
High-altitude wetland holds freshwater springs, evaporitic ponds and lagoon with variable
salinity and nutrients, potentially influencing the ecology of nitrifying communities. In this …

A comparison of methods used to unveil the genetic and metabolic pool in the built environment

C Gomez-Silvan, MHY Leung, KA Grue, R Kaur… - Microbiome, 2018 - Springer
Background A majority of indoor residential microbes originate from humans, pets, and
outdoor air and are not adapted to the built environment (BE). Consequently, a large portion …

Archaeal community in a human-disturbed watershed in southeast China: diversity, distribution, and responses to environmental changes

A Hu, H Wang, J Li, J Liu, N Chen, CP Yu - Applied Microbiology and …, 2016 - Springer
The response of freshwater bacterial community to anthropogenic disturbance has been
well documented, yet the studies of freshwater archaeal community are rare, especially in …

Basin scale variation on the composition and diversity of archaea in the Pacific Ocean

X Xia, W Guo, H Liu - Frontiers in Microbiology, 2017 - frontiersin.org
The Archaea are a widely distributed group of prokaryotes that inhabit and thrive in many
different environments. In the sea, they play key roles in various global biogeochemical …