An overview of targeted Therapies in acute myeloid leukemia

S Turkalj, FA Radtke, P Vyas - Hemasphere, 2023 - journals.lww.com
Acute myeloid leukemia (AML) is the most aggressive adult leukemia, characterized by
clonal differentiation arrest of progenitor or precursor hematopoietic cells. Intense preclinical …

Mapping genotypes to chromatin accessibility profiles in single cells

F Izzo, RM Myers, S Ganesan, L Mekerishvili… - Nature, 2024 - nature.com
In somatic tissue differentiation, chromatin accessibility changes govern priming and
precursor commitment towards cellular fates,–. Therefore, somatic mutations are likely to …

Selective advantage of mutant stem cells in clonal hematopoiesis occurs by attenuating the deleterious effects of inflammation and aging

NA Jakobsen, S Turkalj, AGX Zeng, B Stoilova… - bioRxiv, 2023 - biorxiv.org
Clonal hematopoiesis (CH) arises when hematopoietic stem cells (HSC) acquire mutations
in genes, including DNMT3A and TET2, conferring a competitive advantage through a …

Precise single-cell transcriptomic mapping of normal and leukemic cell states reveals unconventional lineage priming in acute myeloid leukemia

AGX Zeng, I Iacobucci, S Shah, A Mitchell, G Wong… - bioRxiv, 2023 - biorxiv.org
Initial classification of acute leukemia involves the assignment of blasts to cell states within
the hematopoietic hierarchy based on morphological and immunophenotypic features. Yet …

[HTML][HTML] A protocol for simultaneous high-sensitivity genotyping and chromatin accessibility profiling in single cells

S Turkalj, NA Jakobsen, A Groom, FA Radtke, P Vyas - STAR protocols, 2023 - Elsevier
Single-cell assay for transposase-accessible chromatin with sequencing (scATAC-seq)
resolves the heterogeneity of epigenetic states across cells but does not typically capture …

Single-cell genotype-phenotype mapping identifies therapeutic vulnerabilities in VEXAS syndrome

S Ganesan, RM Murray, J Sotelo, EO Eton… - bioRxiv, 2024 - biorxiv.org
Somatic evolution leads to the emergence of clonal diversity across tissues with broad
implications for human health. A striking example of somatic evolution is the VEXAS …