Biomarker development in the precision medicine era: lung cancer as a case study

AJ Vargas, CC Harris - Nature reviews cancer, 2016 - nature.com
Precision medicine relies on validated biomarkers with which to better classify patients by
their probable disease risk, prognosis and/or response to treatment. Although …

Lung cancer epigenetics: from knowledge to applications

M Duruisseaux, M Esteller - Seminars in cancer biology, 2018 - Elsevier
Lung cancer is the leading cause of cancer-related mortality worldwide. Advances in our
understanding of the genomics of lung cancer have led to substantial progress in the …

[HTML][HTML] MicroRNA in lung cancer: novel biomarkers and potential tools for treatment

K Inamura, Y Ishikawa - Journal of clinical medicine, 2016 - mdpi.com
Lung cancer is the leading cause of cancer death in men and women worldwide. The lack of
specific and sensitive tools for early diagnosis as well as still-inadequate targeted therapies …

[HTML][HTML] Multi-scale integrative analyses identify THBS2+ cancer-associated fibroblasts as a key orchestrator promoting aggressiveness in early-stage lung …

H Yang, B Sun, L Fan, W Ma, K Xu, SRR Hall… - Theranostics, 2022 - ncbi.nlm.nih.gov
Rationale: Subsets of patients with early-stage lung adenocarcinoma (LUAD) have a poor
post-surgical course after curative surgery. However, biomarkers stratifying this high-risk …

Predictability of human differential gene expression

M Crow, N Lim, S Ballouz… - Proceedings of the …, 2019 - National Acad Sciences
Differential expression (DE) is commonly used to explore molecular mechanisms of
biological conditions. While many studies report significant results between their groups of …

Methods to increase reproducibility in differential gene expression via meta-analysis

TE Sweeney, WA Haynes, F Vallania… - Nucleic acids …, 2017 - academic.oup.com
Findings from clinical and biological studies are often not reproducible when tested in
independent cohorts. Due to the testing of a large number of hypotheses and relatively small …

[HTML][HTML] A systematic review of progress toward unlocking the power of epigenetics in NSCLC: Latest updates and perspectives

A Sulewska, L Pilz, C Manegold, R Ramlau… - Cells, 2023 - mdpi.com
Epigenetic research has the potential to improve our understanding of the pathogenesis of
cancer, specifically non-small-cell lung cancer, and support our efforts to personalize the …

[HTML][HTML] Diagnostic, progressive and prognostic performance of m6A methylation RNA regulators in lung adenocarcinoma

Z Zhuang, L Chen, Y Mao, Q Zheng, H Li… - … journal of biological …, 2020 - ncbi.nlm.nih.gov
Background: N6-methyladenosine (m 6 A) RNA methylation is dynamically and reversibly
regulated by methyl-transferases (" writers"), binding proteins (" readers"), and demethylases …

[HTML][HTML] Effect of tobacco smoking on the epigenetic age of human respiratory organs

X Wu, Q Huang, R Javed, J Zhong, H Gao, H Liang - Clinical epigenetics, 2019 - Springer
Background Smoking leads to the aging of organs. However, no studies have been
conducted to quantify the effect of smoking on the aging of respiratory organs and the aging …

[HTML][HTML] MRI-based Radiomics nomogram to detect primary rectal cancer with synchronous liver metastases

Z Shu, S Fang, Z Ding, D Mao, R Cai, Y Chen… - Scientific reports, 2019 - nature.com
Synchronous liver metastasis (SLM) remains a major challenge for rectal cancer. Early
detection of SLM is a key factor to improve the survival rate of rectal cancer. In this radiomics …