Stability, robustness, and containment: preparing synthetic biology for real-world deployment
Highlights•Environmentally responsive survival circuitry enable synthetic cell containment.•
Increased genetic stability by engineering sequence and host context.•Control circuits for …
Increased genetic stability by engineering sequence and host context.•Control circuits for …
Accelerating Diverse Cell-Based Therapies Through Scalable Design
EL Peterman, D Ploessl… - Annual Review of …, 2024 - annualreviews.org
Augmenting cells with novel, genetically encoded functions will support therapies that
expand beyond natural capacity for immune surveillance and tissue regeneration. However …
expand beyond natural capacity for immune surveillance and tissue regeneration. However …
Revealing the host-dependent nature of an engineered genetic inverter in concordance with physiology
DTC Chan, GS Baldwin, HC Bernstein - Biodesign Research, 2023 - spj.science.org
Broad-host-range synthetic biology is an emerging frontier that aims to expand our current
engineerable domain of microbial hosts for biodesign applications. As more novel species …
engineerable domain of microbial hosts for biodesign applications. As more novel species …
[HTML][HTML] miRNA circuit modules for precise, tunable control of gene expression
The ability to express transgenes at specified levels is critical for understanding cellular
behaviors, and for applications in gene and cell therapy. Transfection, viral vectors, and …
behaviors, and for applications in gene and cell therapy. Transfection, viral vectors, and …
Bacteriophage self-counting in the presence of viral replication
T Yao, S Coleman, TVP Nguyen… - Proceedings of the …, 2021 - National Acad Sciences
When host cells are in low abundance, temperate bacteriophages opt for dormant
(lysogenic) infection. Phage lambda implements this strategy by increasing the frequency of …
(lysogenic) infection. Phage lambda implements this strategy by increasing the frequency of …
CRISPR perfect adaptation for robust control of cellular immune and apoptotic responses
Y Zhang, S Zhang - Nucleic Acids Research, 2024 - academic.oup.com
A central challenge in the quest for precise gene regulation within mammalian cells is the
development of regulatory networks that can achieve perfect adaptation—where outputs …
development of regulatory networks that can achieve perfect adaptation—where outputs …
Model-guided design of microRNA-based gene circuits supports precise dosage of transgenic cargoes into diverse primary cells
KS Love, CP Johnstone, EL Peterman, S Gaglione… - bioRxiv, 2024 - biorxiv.org
To realize the potential of engineered cells in therapeutic applications, transgenes must be
expressed within the window of therapeutic efficacy. Differences in copy number and other …
expressed within the window of therapeutic efficacy. Differences in copy number and other …
An account of models of molecular circuits for associative learning with reinforcement effect and forced dissociation
The development of synthetic biology has enabled massive progress in biotechnology and
in approaching research questions from a brand-new perspective. In particular, the design …
in approaching research questions from a brand-new perspective. In particular, the design …
Optogenetic application to investigating cell behavior and neurological disease
Cells reside in a dynamic microenvironment that presents them with regulatory signals that
vary in time, space, and amplitude. The cell, in turn, interprets these signals and accordingly …
vary in time, space, and amplitude. The cell, in turn, interprets these signals and accordingly …
Facilitating Machine Learning‐Guided Protein Engineering with Smart Library Design and Massively Parallel Assays
HY Chu, ASL Wong - Advanced Genetics, 2021 - Wiley Online Library
Protein design plays an important role in recent medical advances from antibody therapy to
vaccine design. Typically, exhaustive mutational screens or directed evolution experiments …
vaccine design. Typically, exhaustive mutational screens or directed evolution experiments …