Resistance mechanisms influencing oncolytic virotherapy, a systematic analysis

DK Bhatt, R Chammas, T Daemen - Vaccines, 2021 - mdpi.com
Resistance to therapy is a frequently observed phenomenon in the treatment of cancer, and
as with other cancer therapeutics, therapies based on oncolytic viruses also face the …

Proteomics and pulse azidohomoalanine labeling of newly synthesized proteins: what are the potential applications?

Y Ma, JR Yates III - Expert review of proteomics, 2018 - Taylor & Francis
Introduction: Measuring the immediate changes in cells that arise from changing
environmental conditions is crucial to understanding the underlying mechanisms involved …

Nucleocytoplasmic proteomic analysis uncovers eRF1 and nonsense-mediated decay as modifiers of ALS/FTD C9orf72 toxicity

JA Ortega, EL Daley, S Kour, M Samani, L Tellez… - Neuron, 2020 - cell.com
The most common genetic cause of amyotrophic lateral sclerosis (ALS) and frontotemporal
dementia (FTD) is a hexanucleotide repeat expansion in C9orf72 (C9-HRE). While RNA and …

Proteomics‐based scoring of cellular response to stimuli for improved characterization of signaling pathway activity

EM Kazakova, EM Solovyeva, LI Levitsky… - …, 2023 - Wiley Online Library
Omics technologies focus on uncovering the complex nature of molecular mechanisms in
cells and organisms, including biomarkers and drug targets discovery. Aiming at these tasks …

Multi-omics analysis of glioblastoma cells' sensitivity to oncolytic viruses

AV Lipatova, AV Soboleva, VA Gorshkov, JA Bubis… - Cancers, 2021 - mdpi.com
Simple Summary This study aims to uncover the contribution of interferon-dependent
antiviral mechanisms preserved in tumor cells to the resistance of glioblastoma multiforme …

Profiling modifications for glioblastoma proteome using ultra-tolerant database search: Are the peptide mass shifts biologically relevant or chemically induced?

IA Tarasova, PM Chumakov, SA Moshkovskii… - Journal of …, 2019 - Elsevier
Peptide mass shifts were profiled using ultra-tolerant database search strategy for shotgun
proteomics data sets of human glioblastoma cell lines demonstrating strong response to the …

Identification of hub genes and their novel diagnostic and prognostic significance in pancreatic adenocarcinoma

D Zuo, Y Chen, X Zhang, Z Wang… - Cancer Biology & …, 2021 - pmc.ncbi.nlm.nih.gov
Objective: The main reasons for the poor prognoses of pancreatic adenocarcinoma (PA)
patients are rapid early-stage progression, advanced stage metastasis, and chemotherapy …

Comparable genomic copy number aberrations differ across astrocytoma malignancy grades

N Pećina-Šlaus, A Kafka, K Gotovac Jerčić… - International Journal of …, 2019 - mdpi.com
A collection of intracranial astrocytomas of different malignancy grades was analyzed for
copy number aberrations (CNA) in order to identify regions that are driving cancer …

Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis …

AS Nikitina, AV Lipatova, AO Goncharov… - International Journal of …, 2022 - mdpi.com
Cancer cell lines responded differentially to type I interferon treatment in models of oncolytic
therapy using vesicular stomatitis virus (VSV). Two opposite cases were considered in this …

Proteomics of cellular response to stress: taking control of false positive results

IT Gabdrakhmanov, MV Gorshkov, IA Tarasova - Biochemistry (Moscow), 2021 - Springer
One of the main goals of quantitative proteomics is molecular profiling of cellular response to
stress at the protein level. To perform this profiling, statistical analysis of experimental data …