A survey on the algorithm and development of multiple sequence alignment
Multiple sequence alignment (MSA) is an essential cornerstone in bioinformatics, which can
reveal the potential information in biological sequences, such as function, evolution and …
reveal the potential information in biological sequences, such as function, evolution and …
Adaptive radiation of the flukes of the family Fasciolidae inferred from genome-wide comparisons of key species
YJ Choi, S Fontenla, PU Fischer, TH Le… - Molecular biology …, 2020 - academic.oup.com
Liver and intestinal flukes of the family Fasciolidae cause zoonotic food–borne infections
that impact both agriculture and human health throughout the world. Their evolutionary …
that impact both agriculture and human health throughout the world. Their evolutionary …
Identification of potential key genes and pathways associated with the Pashmina fiber initiation using RNA-Seq and integrated bioinformatics analysis
Pashmina goat (Capra hircus) is an economically important livestock species, which habitats
the cold arid desert of the Ladakh region (India), and produces a princely animal fiber called …
the cold arid desert of the Ladakh region (India), and produces a princely animal fiber called …
Structural and evolutionary analyses of the Plasmodium falciparum chloroquine resistance transporter
Mutations in the Plasmodium falciparum chloroquine resistance transporter (PfCRT) confer
resistance to several antimalarial drugs such as chloroquine (CQ) or piperaquine (PPQ), a …
resistance to several antimalarial drugs such as chloroquine (CQ) or piperaquine (PPQ), a …
TranCEP: Predicting the substrate class of transmembrane transport proteins using compositional, evolutionary, and positional information
Transporters mediate the movement of compounds across the membranes that separate the
cell from its environment and across the inner membranes surrounding cellular …
cell from its environment and across the inner membranes surrounding cellular …
Comparative transcriptome analysis reveals the genetic basis of coat color variation in Pashmina goat
The genetics of coat color variation remains a classic area. Earlier studies have focused on
a limited number of genes involved in color determination; however, the complete set of trait …
a limited number of genes involved in color determination; however, the complete set of trait …
Multiple sequence alignment based on deep reinforcement learning with self-attention and positional encoding
Y Liu, H Yuan, Q Zhang, Z Wang, S Xiong, N Wen… - …, 2023 - academic.oup.com
Motivation Multiple sequence alignment (MSA) is one of the hotspots of current research and
is commonly used in sequence analysis scenarios. However, there is no lasting solution for …
is commonly used in sequence analysis scenarios. However, there is no lasting solution for …
SNPs in Mammary gland epithelial cells unraveling potential difference in milk production between jersey and kashmiri cattle using RNA sequencing
Deep RNA sequencing experiment was employed to detect putative single nucleotide
polymorphisms (SNP) in mammary epithelial cells between two diverse cattle breeds …
polymorphisms (SNP) in mammary epithelial cells between two diverse cattle breeds …
Genome wide expression analysis of circular RNAs in mammary epithelial cells of cattle revealed difference in milk synthesis
Milk is an excellent source of nutrients for humans. Therefore, in order to enhance the quality
and production of milk in cattle, it is interesting to examine the underlying mechanisms. A …
and production of milk in cattle, it is interesting to examine the underlying mechanisms. A …
Topology prediction of insect olfactory receptors
Highlights•Insect Olfactory Receptors retain a different topology than GPCRs and vertebrate
ORs.•Multiple TMH prediction methods exist and few of them are robust and suitable for …
ORs.•Multiple TMH prediction methods exist and few of them are robust and suitable for …