Miniature inverted-repeat transposable elements (MITEs), derived insertional polymorphism as a tool of marker systems for molecular plant breeding
Plant molecular breeding is expected to give significant gains in cultivar development
through development and utilization of suitable molecular marker systems for genetic …
through development and utilization of suitable molecular marker systems for genetic …
[HTML][HTML] Rapid detection of wheat blast pathogen Magnaporthe oryzae Triticum pathotype using genome-specific primers and Cas12a-mediated technology
Wheat blast, caused by the fungus Magnaporthe oryzae Triticum (MoT) pathotype, is a
devastating disease persistent in South America and Bangladesh. Since MoT generally fails …
devastating disease persistent in South America and Bangladesh. Since MoT generally fails …
Chromosome-scale genome assembly of a Japanese chili pepper landrace, Capsicum annuum 'Takanotsume'
K Shirasawa, M Hosokawa, Y Yasui, A Toyoda… - DNA …, 2023 - academic.oup.com
Here, we report the genome sequence of a popular Japanese chili pepper landrace,
Capsicum annuum 'Takanotsume'. We used long-read sequencing and optical mapping …
Capsicum annuum 'Takanotsume'. We used long-read sequencing and optical mapping …
[PDF][PDF] Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae
DE Torres, BPHJ Thomma… - Genome Biology and …, 2021 - academic.oup.com
Transposable elements (TEs) are a major source of genetic and regulatory variation in their
host genome and are consequently thought to play important roles in evolution. Many fungal …
host genome and are consequently thought to play important roles in evolution. Many fungal …
Generic repeat finder: a high-sensitivity tool for genome-wide de novo repeat detection
J Shi, C Liang - Plant physiology, 2019 - academic.oup.com
Comprehensive and accurate annotation of the repeatome, including transposons, is critical
for deepening our understanding of repeat origins, biogenesis, regulatory mechanisms, and …
for deepening our understanding of repeat origins, biogenesis, regulatory mechanisms, and …
Telomere-to-telomere genome assembly of matsutake (Tricholoma matsutake)
H Kurokochi, N Tajima, MP Sato, K Yoshitake… - DNA …, 2023 - academic.oup.com
Here, we report the first telomere-to-telomere genome assembly of matsutake (Tricholoma
matsutake), which consists of 13 sequences (spanning 161.0 Mb) and a 76 kb circular …
matsutake), which consists of 13 sequences (spanning 161.0 Mb) and a 76 kb circular …
Identification of two novel rice S genes through combination of association and transcription analyses with gene‐editing technology
Y Xu, L Bai, M Liu, Y Liu, S Peng, P Hu… - Plant Biotechnology …, 2023 - Wiley Online Library
Traditional rice blast resistance breeding largely depends on utilizing typical resistance (R)
genes. However, the lack of durable R genes has prompted rice breeders to find new …
genes. However, the lack of durable R genes has prompted rice breeders to find new …
Developing transposable element marker system for molecular breeding
RS Bhat, K Shirasawa, Y Monden, H Yamashita… - … genomics: methods and …, 2020 - Springer
Transposable element (TE) marker system was developed considering the useful properties
of the transposable elements such as their large number in the animal and plant genomes …
of the transposable elements such as their large number in the animal and plant genomes …
Development of AhMITE1 markers through genome-wide analysis in peanut (Arachis hypogaea L.)
Objective In peanut, the DNA polymorphism is very low despite enormous phenotypic
variations. This limits the use of genomics-assisted breeding to enhance peanut productivity …
variations. This limits the use of genomics-assisted breeding to enhance peanut productivity …
Identification of an active miniature inverted‐repeat transposable element mJing in rice
Y Tang, X Ma, S Zhao, W Xue, X Zheng… - The Plant …, 2019 - Wiley Online Library
Miniature inverted‐repeat transposable elements (MITE s) are structurally homogeneous
non‐autonomous DNA transposons with high copy numbers that play important roles in …
non‐autonomous DNA transposons with high copy numbers that play important roles in …