Revisiting the rules of life for viruses of microorganisms

AMS Correa, C Howard-Varona, SR Coy… - Nature Reviews …, 2021 - nature.com
Viruses that infect microbial hosts have traditionally been studied in laboratory settings with
a focus on either obligate lysis or persistent lysogeny. In the environment, these infection …

Bacteriophages in natural and artificial environments

S Batinovic, F Wassef, SA Knowler, DTF Rice… - Pathogens, 2019 - mdpi.com
Bacteriophages (phages) are biological entities that have attracted a great deal of attention
in recent years. They have been reported as the most abundant biological entities on the …

Viral community-wide auxiliary metabolic genes differ by lifestyles, habitats, and hosts

XQ Luo, P Wang, JL Li, M Ahmad, L Duan, LZ Yin… - Microbiome, 2022 - Springer
Background Viral-encoded auxiliary metabolic genes (AMGs) are important toolkits for
modulating their hosts' metabolisms and the microbial-driven biogeochemical cycles …

Plant microbiomes harbor potential to promote nutrient turnover in impoverished substrates of a Brazilian biodiversity hotspot

AP Camargo, RSC de Souza, J Jose… - The ISME …, 2023 - academic.oup.com
The substrates of the Brazilian campos rupestre s, a grassland ecosystem, have extremely
low concentrations of phosphorus and nitrogen, imposing restrictions to plant growth …

A systematic analysis of marine lysogens and proviruses

Y Yi, S Liu, Y Hao, Q Sun, X Lei, Y Wang… - Nature …, 2023 - nature.com
Viruses are ubiquitous in the oceans, exhibiting high abundance and diversity. Here, we
systematically analyze existing genomic sequences of marine prokaryotes to compile a …

Enhanced mutualistic symbiosis between soil phages and bacteria with elevated chromium-induced environmental stress

D Huang, P Yu, M Ye, C Schwarz, X Jiang, PJJ Alvarez - Microbiome, 2021 - Springer
Background Microbe–virus interactions have broad implications on the composition,
function, and evolution of microbiomes. Elucidating the effects of environmental stresses on …

The life cycle transitions of temperate phages: regulating factors and potential ecological implications

M Zhang, T Zhang, M Yu, YL Chen, M Jin - Viruses, 2022 - mdpi.com
Phages are viruses that infect bacteria. They affect various microbe-mediated processes that
drive biogeochemical cycling on a global scale. Their influence depends on whether the …

Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages

K Kieft, Z Zhou, RE Anderson, A Buchan… - Nature …, 2021 - nature.com
Microbial sulfur metabolism contributes to biogeochemical cycling on global scales. Sulfur
metabolizing microbes are infected by phages that can encode auxiliary metabolic genes …

[HTML][HTML] Reprogramming bacteriophage host range: design principles and strategies for engineering receptor binding proteins

M Dunne, NS Prokhorov, MJ Loessner… - Current opinion in …, 2021 - Elsevier
Highlights•Phages use structurally diverse receptor binding proteins (RBPs) to target
different cell wall structures.•RBPs play a critical role in spatial and temporal positioning of …

Diversity, taxonomy, and evolution of archaeal viruses of the class Caudoviricetes

Y Liu, TA Demina, S Roux, P Aiewsakun… - PLoS …, 2021 - journals.plos.org
The archaeal tailed viruses (arTV), evolutionarily related to tailed double-stranded DNA
(dsDNA) bacteriophages of the class Caudoviricetes, represent the most common isolates …