Spatio-temporal transcript profiling of rice roots and shoots in response to phosphate starvation and recovery
Using rice (Oryza sativa) as a model crop species, we performed an in-depth temporal
transcriptome analysis, covering the early and late stages of Pi deprivation as well as Pi …
transcriptome analysis, covering the early and late stages of Pi deprivation as well as Pi …
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
Small RNAs have a variety of important roles in plant development, stress responses, and
other processes. They exert their influence by guiding mRNA cleavage, translational …
other processes. They exert their influence by guiding mRNA cleavage, translational …
PMRD: plant microRNA database
MicroRNAs (miRNA) are∼ 21 nucleotide-long non-coding small RNAs, which function as
post-transcriptional regulators in eukaryotes. miRNAs play essential roles in regulating plant …
post-transcriptional regulators in eukaryotes. miRNAs play essential roles in regulating plant …
Transcriptome‐wide identification of microRNA targets in rice
YF Li, Y Zheng, C Addo‐Quaye, L Zhang… - The Plant …, 2010 - Wiley Online Library
MicroRNA (miRNA)‐guided target RNA expression is vital for a wide variety of biological
processes in eukaryotes. Currently, miRBase (version 13) lists 142 and 353 miRNAs from …
processes in eukaryotes. Currently, miRBase (version 13) lists 142 and 353 miRNAs from …
Identification of grapevine microRNAs and their targets using high‐throughput sequencing and degradome analysis
In plants, microRNAs (miRNAs) comprise one of three classes of small RNAs regulating
gene expression at the post‐transcriptional level. Many plant miRNAs are conserved, and …
gene expression at the post‐transcriptional level. Many plant miRNAs are conserved, and …
Identification and analysis of seven H2O2-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)
T Li, H Li, YX Zhang, JY Liu - Nucleic acids research, 2011 - academic.oup.com
Plant microRNAs (miRNAs) have been shown to play critical roles in regulating gene
expression at the post-transcriptional level. In this study, we employed high throughput …
expression at the post-transcriptional level. In this study, we employed high throughput …
Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors
RNA silencing, mediated by small RNAs including microRNAs (miRNAs) and small
interfering RNAs (siRNAs), is a potent antiviral or antibacterial mechanism, besides …
interfering RNAs (siRNAs), is a potent antiviral or antibacterial mechanism, besides …
Complex regulation of two target genes encoding SPX-MFS proteins by rice miR827 in response to phosphate starvation
SI Lin, C Santi, E Jobet, E Lacut… - Plant and Cell …, 2010 - academic.oup.com
Here we report on the characterization of rice osa-miR827 and its two target genes, OsSPX-
MFS1 and OsSPX-MFS2, which encode SPX-MFS proteins predicted to be implicated in …
MFS1 and OsSPX-MFS2, which encode SPX-MFS proteins predicted to be implicated in …
Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica)
MicroRNAs (miRNAs) and small interfering RNAs (siRNAs) regulate gene expression in
eukaryotes. Plant miRNAs modulate their targets mainly via messenger RNA (mRNA) …
eukaryotes. Plant miRNAs modulate their targets mainly via messenger RNA (mRNA) …
Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
LQ Wei, LF Yan, T Wang - Genome biology, 2011 - Springer
Background Pollen development in flowering plants requires strict control of the gene
expression program and genetic information stability by mechanisms possibly including the …
expression program and genetic information stability by mechanisms possibly including the …