Epitope-based vaccine design: a comprehensive overview of bioinformatics approaches

S Parvizpour, MM Pourseif, J Razmara, MA Rafi… - Drug Discovery …, 2020 - Elsevier
Highlights•Epitope vaccines provide maximal therapeutic efficacy with minimal side
effects.•Reverse vaccinology can be used for designing epitope vaccines.•Computational …

Self-amplifying mRNA vaccines: Mode of action, design, development and optimization

MM Pourseif, Y Masoudi-Sobhanzadeh, E Azari… - Drug Discovery …, 2022 - Elsevier
Highlights•The mRNA-based vaccines are tunable quality-by-design immunotherapy
modalities for different diseases.•Self-amplifying mRNA (saRNA) vaccines, a kind of mRNA …

[HTML][HTML] A domain-based vaccine construct against SARS-CoV-2, the causative agent of COVID-19 pandemic: development of self-amplifying mRNA and peptide …

MM Pourseif, S Parvizpour, B Jafari, J Dehghani… - BioImpacts …, 2021 - ncbi.nlm.nih.gov
Methods: In this study, we have targeted spike (S) glycoprotein, as an important surface
antigen to identify its B-and T-cell immunodominant regions. We have conducted a multi …

Design of a Novel Multi-Epitope Vaccine Against Echinococcus granulosus in Immunoinformatics

M Yu, Y Zhu, Y Li, Z Chen, T Sha, Z Li, F Zhang… - Frontiers in …, 2021 - frontiersin.org
All the time, echinococcosis is a global zoonotic disease which seriously endangers public
health all over the world. In order to speed up the development process of anti …

[HTML][HTML] A multi-method and structure-based in silico vaccine designing against Echinococcus granulosus through investigating enolase protein

MM Pourseif, M Yousefpour, M Aminianfar… - BioImpacts …, 2019 - ncbi.nlm.nih.gov
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Introduction: Hydatid disease is a ubiquitous parasitic zoonotic disease, which causes …

In silico design of a triple-negative breast cancer vaccine by targeting cancer testis antigens

S Parvizpour, J Razmara, MM Pourseif… - BioImpacts: BI, 2018 - pmc.ncbi.nlm.nih.gov
Introduction: Triple-negative breast cancer (TNBC) is an important subtype of breast cancer,
which occurs in the absence of estrogen, progesterone and HER-2 receptors. According to …

A novel multi-objective metaheuristic algorithm for protein-peptide docking and benchmarking on the LEADS-PEP dataset

Y Masoudi-Sobhanzadeh, B Jafari, S Parvizpour… - Computers in Biology …, 2021 - Elsevier
Protein-peptide interactions have attracted the attention of many drug discovery scientists
due to their possible druggability features on most key biological activities such as …

Design of a new multi-epitope vaccine against Brucella based on T and B cell epitopes using bioinformatics methods

Z Chen, Y Zhu, T Sha, Z Li, Y Li, F Zhang… - Epidemiology & …, 2021 - cambridge.org
Brucellosis is one of the most serious and widespread zoonotic diseases, which seriously
threatens human health and the national economy. This study was based on the T/B …

Towards a new avenue for producing therapeutic proteins: Microalgae as a tempting green biofactory

J Dehghani, K Adibkia, A Movafeghi… - Biotechnology …, 2020 - Elsevier
Most of the recent approved therapeutic proteins are multi-subunit biologics, which need
glycosylation and disulfide bridges for their correct conformation and biological functions …

Reverse engineering protection: A comprehensive survey of reverse vaccinology-based vaccines targeting viral pathogens

S Ponne, R Kumar, SM Vanmathi, RSN Brilhante… - Vaccine, 2024 - Elsevier
Vaccines have significantly reduced the impact of numerous deadly viral infections.
However, there is an increasing need to expedite vaccine development in light of the …