The contribution of intrinsically disordered regions to protein function, cellular complexity, and human disease
MM Babu - Biochemical Society Transactions, 2016 - portlandpress.com
In the 1960s, Christian Anfinsen postulated that the unique three-dimensional structure of a
protein is determined by its amino acid sequence. This work laid the foundation for the …
protein is determined by its amino acid sequence. This work laid the foundation for the …
The nexus between RNA-binding proteins and their effectors
RNA-binding proteins (RBPs) regulate essentially every event in the lifetime of an RNA
molecule, from its production to its destruction. Whereas much has been learned about RNA …
molecule, from its production to its destruction. Whereas much has been learned about RNA …
The eukaryotic linear motif resource: 2022 release
M Kumar, S Michael, J Alvarado-Valverde… - Nucleic acids …, 2022 - academic.oup.com
Almost twenty years after its initial release, the Eukaryotic Linear Motif (ELM) resource
remains an invaluable source of information for the study of motif-mediated protein-protein …
remains an invaluable source of information for the study of motif-mediated protein-protein …
ELM—the eukaryotic linear motif resource in 2020
M Kumar, M Gouw, S Michael… - Nucleic acids …, 2020 - academic.oup.com
Studies on the DNA-binding properties of transcription factors are important in searching for
the downstream genes regulated by these factors. In the present study, we report on the …
the downstream genes regulated by these factors. In the present study, we report on the …
ELM—the Eukaryotic Linear Motif resource—2024 update
M Kumar, S Michael, J Alvarado-Valverde… - Nucleic acids …, 2024 - academic.oup.com
Abstract Short Linear Motifs (SLiMs) are the smallest structural and functional components of
modular eukaryotic proteins. They are also the most abundant, especially when considering …
modular eukaryotic proteins. They are also the most abundant, especially when considering …
ELM 2016—data update and new functionality of the eukaryotic linear motif resource
H Dinkel, K Van Roey, S Michael, M Kumar… - Nucleic acids …, 2016 - academic.oup.com
Abstract The Eukaryotic Linear Motif (ELM) resource (http://elm. eu. org) is a manually
curated database of short linear motifs (SLiMs). In this update, we present the latest …
curated database of short linear motifs (SLiMs). In this update, we present the latest …
Interactions by disorder–a matter of context
K Bugge, I Brakti, CB Fernandes, JE Dreier… - Frontiers in Molecular …, 2020 - frontiersin.org
Living organisms depend on timely and organized interactions between proteins linked in
interactomes of high complexity. The recent increased precision by which protein …
interactomes of high complexity. The recent increased precision by which protein …
The eukaryotic linear motif resource–2018 update
M Gouw, S Michael, H Sámano-Sánchez… - Nucleic acids …, 2018 - academic.oup.com
Short linear motifs (SLiMs) are protein binding modules that play major roles in almost all
cellular processes. SLiMs are short, often highly degenerate, difficult to characterize and …
cellular processes. SLiMs are short, often highly degenerate, difficult to characterize and …
From interaction networks to interfaces, scanning intrinsically disordered regions using AlphaFold2
The revolution brought about by AlphaFold2 opens promising perspectives to unravel the
complexity of protein-protein interaction networks. The analysis of interaction networks …
complexity of protein-protein interaction networks. The analysis of interaction networks …
Mutations in disordered regions can cause disease by creating dileucine motifs
Many disease-causing missense mutations affect intrinsically disordered regions (IDRs) of
proteins, but the molecular mechanism of their pathogenicity is enigmatic. Here, we employ …
proteins, but the molecular mechanism of their pathogenicity is enigmatic. Here, we employ …