Genomes OnLine Database (GOLD) v. 8: overview and updates
S Mukherjee, D Stamatis, J Bertsch… - Nucleic acids …, 2021 - academic.oup.com
Abstract The Genomes OnLine Database (GOLD)(https://gold. jgi. doe. gov/) is a manually
curated, daily updated collection of genome projects and their metadata accumulated from …
curated, daily updated collection of genome projects and their metadata accumulated from …
FungiDB: an integrated bioinformatic resource for fungi and oomycetes
FungiDB (fungidb. org) is a free online resource for data mining and functional genomics
analysis for fungal and oomycete species. FungiDB is part of the Eukaryotic Pathogen …
analysis for fungal and oomycete species. FungiDB is part of the Eukaryotic Pathogen …
A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA
KH Kjær, M Winther Pedersen, B De Sanctis… - Nature, 2022 - nature.com
Abstract Late Pliocene and Early Pleistocene epochs 3.6 to 0.8 million years ago had
climates resembling those forecasted under future warming. Palaeoclimatic records show …
climates resembling those forecasted under future warming. Palaeoclimatic records show …
The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity
EnteroBase is an integrated software environment that supports the identification of global
population structures within several bacterial genera that include pathogens. Here, we …
population structures within several bacterial genera that include pathogens. Here, we …
[HTML][HTML] Fungal diversity notes 1387–1511: Taxonomic and phylogenetic contributions on genera and species of fungal taxa
This article is the 13th contribution in the Fungal Diversity Notes series, wherein 125 taxa
from four phyla, ten classes, 31 orders, 69 families, 92 genera and three genera incertae …
from four phyla, ten classes, 31 orders, 69 families, 92 genera and three genera incertae …
KEGG: new perspectives on genomes, pathways, diseases and drugs
M Kanehisa, M Furumichi, M Tanabe… - Nucleic acids …, 2017 - academic.oup.com
Abstract KEGG (http://www. kegg. jp/or http://www. genome. jp/kegg/) is an encyclopedia of
genes and genomes. Assigning functional meanings to genes and genomes both at the …
genes and genomes. Assigning functional meanings to genes and genomes both at the …
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
Abstract The Pathosystems Resource Integration Center (PATRIC) is the bacterial
Bioinformatics Resource Center (https://www. patricbrc. org). Recent changes to PATRIC …
Bioinformatics Resource Center (https://www. patricbrc. org). Recent changes to PATRIC …
Identification of a novel transposon-associated phosphoethanolamine transferase gene, mcr-5, conferring colistin resistance in d-tartrate fermenting Salmonella enterica subsp …
M Borowiak, J Fischer, JA Hammerl… - Journal of …, 2017 - academic.oup.com
Objectives Plasmid-mediated mobilized colistin resistance is currently known to be caused
by phosphoethanolamine transferases termed MCR-1, MCR-2, MCR-3 and MCR-4 …
by phosphoethanolamine transferases termed MCR-1, MCR-2, MCR-3 and MCR-4 …
[HTML][HTML] Database resources of the national center for biotechnology information
NR Coordinators - Nucleic acids research, 2017 - ncbi.nlm.nih.gov
Abstract The National Center for Biotechnology Information (NCBI) provides a large suite of
online resources for biological information and data, including the GenBank® nucleic acid …
online resources for biological information and data, including the GenBank® nucleic acid …
Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species
PJ Kersey, JE Allen, A Allot, M Barba… - Nucleic acids …, 2018 - academic.oup.com
Abstract Ensembl Genomes (http://www. ensemblgenomes. org) is an integrating resource
for genome-scale data from non-vertebrate species, complementing the resources for …
for genome-scale data from non-vertebrate species, complementing the resources for …